RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 VRK2Q86Y07 508 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 WFDC8Q8IUA0 241 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 FUNDC1Q8IVP5 155 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 UEVLDQ8IX04 471 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 GABRG1Q8N1C3 465 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 CLIP4Q8N3C7 705 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 GPR137CQ8N3F9 429 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 SCAIQ8N9R8 606 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 ADPRHL1Q8NDY3 354 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 PIK3C3Q8NEB9 887 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 IL17RDQ8NFM7 739 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 OR10A6Q8NH74 314 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 MAL2Q969L2 176 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 FBXW5Q969U6 566 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 C3orf49Q96BT1 292 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 S100PBPQ96BU1 408 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 SLC25A36Q96CQ1 311 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 LRRC58Q96CX6 371 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 THOC1Q96FV9 657 aaKnown RBP4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 PLPPR2Q96GM1 343 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 ARL5BQ96KC2 179 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 ADAD1Q96M93 576 aaKnown RBP4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 HS6ST2Q96MM7 605 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 OXGR1Q96P68 337 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 TMEM43Q9BTV4 400 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 SLCO5A1Q9H2Y9 848 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 GSX1Q9H4S2 264 aaPredicted RBP4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 DENND2DQ9H6A0 471 aaPredicted RBP4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 KAT8Q9H7Z6 458 aaKnown RBP4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 UBTD1Q9HAC8 227 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 BARX1Q9HBU1 254 aaPredicted RBP4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 KRCC1Q9NPI7 259 aaPredicted RBP4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 DLL4Q9NR61 685 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 CCM2LQ9NUG4 571 aaPredicted RBP4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 RLIMQ9NVW2 624 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 MALT1Q9UDY8 824 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 FBXL3Q9UKT7 428 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 RCE1Q9Y256 329 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 SPEF1Q9Y4P9 236 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 NOX1Q9Y5S8 564 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 AKAP6Q13023 2319 aa4.97□□□□□ -1.61
CLSTN3-215ENST00000544584 HEATR5AQ86XA9 2040 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 A0A087WUJ7 227 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 CENPVL1A0A0U1RR11 272 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 LOC102725191A0A1B0GVB3 256 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 A0A1W2PRG6 482 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 ELOVL7A1L3X0 281 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 TRAPPC13A5PLN9 417 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 GMNCA6NCL1 334 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 OR5H1A6NKK0 313 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 CLDN24A6NM45 220 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 M0QX08 132 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 HS3ST1O14792 307 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 CLOCKO15516 846 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 OIP5O43482 229 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 CHP2O43745 196 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 GCM2O75603 506 aaPredicted RBP4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 LYZL6O75951 148 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 SASH3O75995 380 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 FARS2O95363 451 aaKnown RBP4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 STAMBPO95630 424 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 LGI1O95970 557 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 THRBP10828 461 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 SHC1P29353 583 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 AQP1P29972 269 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 RBM34P42696 430 aaKnown RBP4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 RPS5P46782 204 aaKnown RBP4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 TAS2R41P59536 307 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 RPS4XP62701 263 aaKnown RBP4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 NKX6-1P78426 367 aaPredicted RBP4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 GUCY1A3Q02108 690 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 CHRNB3Q05901 458 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 LTBQ06643 244 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 PUDPQ08623 228 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 FAPQ12884 760 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 KLF10Q13118 480 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 PMS2P3Q13401 168 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 OR1Q1Q15612 314 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 NRF1Q16656 503 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 VMACQ2NL98 169 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 GTDC1Q4AE62 458 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 RPS26P11Q5JNZ5 115 aaPredicted RBP4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 AGAP6Q5VW22 663 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 ANKRD34AQ69YU3 496 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 NANOGP8Q6NSW7 305 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 ADAM5Q6NVV9 412 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 PLXDC2Q6UX71 529 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 UNQ6126/PRO20091Q6UXV3 157 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 DLEU7Q6UYE1 221 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF704Q6ZNC4 412 aaPredicted RBP4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 NUFIP2Q7Z417 695 aaKnown RBP4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 SPATA21Q7Z572 469 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 DPPA2Q7Z7J5 298 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 ATG4DQ86TL0 474 aaPredicted RBP4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 TGIF2LYQ8IUE0 185 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 FBXL14Q8N1E6 418 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF433Q8N7K0 673 aaPredicted RBP4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF611Q8N823 705 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 ANKS4BQ8N8V4 417 aa4.96□□□□□ -1.62
CLSTN3-215ENST00000544584 OR2T12Q8NG77 320 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms