RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SIRPAP78324 504 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 ILKQ13418 452 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 DUSP5Q16690 384 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 LHX8Q68G74 356 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 ZNF836Q6ZNA1 936 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 LRRC28Q86X40 367 aaPredicted RBP11.85□□□□□ -0.51
CHD4-211ENST00000544484 FOXQ1Q9C009 403 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 C1orf198Q9H425 327 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 CD300AQ9UGN4 299 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 SLC22A7Q9Y694 548 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 B4GALT3O60512 393 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 SLC19A1P41440 591 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 C14orf28Q4W4Y0 310 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 XKR7Q5GH72 579 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 PPP1R35Q8TAP8 253 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 ASB17Q8WXJ9 295 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 MS4A6EQ96DS6 147 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 HRASLS5Q96KN8 279 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 MRI1Q9BV20 369 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 ASF1BQ9NVP2 202 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 TBX21Q9UL17 535 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 NAP1L6A6NFF2 107 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 HSPB6O14558 160 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 CD1CP29017 333 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 DLSTP36957 453 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 CPT1CQ8TCG5 803 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 TMEM106AQ96A25 262 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 RASD2Q96D21 266 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 RSPRY1Q96DX4 576 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 CBX7O95931 251 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 IGLV3-27P01718 113 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 PRKAR1BP31321 381 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 TRIM23P36406 574 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 APOOLQ6UXV4 268 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 DLEU7Q6UYE1 221 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 SLC16A9Q7RTY1 509 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 COMTD1Q86VU5 262 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 SLAMF7Q9NQ25 335 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 COQ3Q9NZJ6 369 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 SNX11Q9Y5W9 270 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 CLDN24A6NM45 220 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 OR7C1O76099 320 aaPredicted RBP11.84□□□□□ -0.51
CHD4-211ENST00000544484 ATP1B3P54709 279 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 LTC4SQ16873 150 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 PTRH1Q86Y79 214 aaKnown RBP11.84□□□□□ -0.51
CHD4-211ENST00000544484 LAX1Q8IWV1 398 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 OR4K15Q8NH41 348 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 ARL5BQ96KC2 179 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 SMIM3Q9BZL3 60 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 ATP13A2Q9NQ11 1180 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 PADI1Q9ULC6 663 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 MAST2Q6P0Q8 1798 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 PRICKLE3O43900 615 aaPredicted RBP11.84□□□□□ -0.51
CHD4-211ENST00000544484 ZNF14P17017 642 aaPredicted RBP11.84□□□□□ -0.51
CHD4-211ENST00000544484 VEGFCP49767 419 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 OR5M1Q8NGP8 315 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 MFFQ9GZY8 342 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 TRAV36DV7A0A075B6V5 113 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 A0A1W2PR48 441 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 B4DXG7 233 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 GFYI3L273 518 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 FZD7O75084 574 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 ATG12O94817 140 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 HOXB5P09067 269 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 RPL34P49207 117 aaKnown RBP11.84□□□□□ -0.51
CHD4-211ENST00000544484 CX3CR1P49238 355 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 EFNA3P52797 238 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 EPHA5P54756 1037 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 PCBD1P61457 104 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 PPP2CBP62714 309 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 PPP2CAP67775 309 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 ACVR1Q04771 509 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 AKR1C8PQ5T2L2 129 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 METAP1DQ6UB28 335 aaPredicted RBP11.84□□□□□ -0.51
CHD4-211ENST00000544484 OR4D6Q8NGJ1 314 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 PFN4Q8NHR9 129 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 SLC7A13Q8TCU3 470 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 NICN1Q9BSH3 213 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 MKRN2Q9H000 416 aaKnown RBP11.84□□□□□ -0.51
CHD4-211ENST00000544484 TMEM38AQ9H6F2 299 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 PLEKHA3Q9HB20 300 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 MMP17Q9ULZ9 603 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 TOGARAM1Q9Y4F4 1720 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 TRAPPC2LH3BP13 241 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 PRKNO60260 465 aaPredicted RBP11.84□□□□□ -0.51
CHD4-211ENST00000544484 FCGR2AP12318 317 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 TEAD1P28347 426 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 GABRA5P31644 462 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 CYCSP99999 105 aaKnown RBP11.84□□□□□ -0.51
CHD4-211ENST00000544484 SF3B4Q15427 424 aaKnown RBP eCLIP11.84□□□□□ -0.512e-7■■■□□ 18.9
CHD4-211ENST00000544484 HSF5Q4G112 596 aaPredicted RBP11.84□□□□□ -0.51
CHD4-211ENST00000544484 GARNL3Q5VVW2 1013 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 NKAIN4Q8IVV8 208 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 OR6F1Q8NGZ6 308 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 SORCS2Q96PQ0 1159 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 EVA1AQ9H8M9 152 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 TNFRSF12AQ9NP84 129 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 SEMA4GQ9NTN9 838 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 EHFQ9NZC4 300 aa11.84□□□□□ -0.51
CHD4-211ENST00000544484 IFNA1P01562 189 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms