RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 MMP26Q9NRE1 261 aa16.78■□□□□ 0.28
CCT4-204ENST00000544079 COMMD9Q9P000 198 aa16.78■□□□□ 0.28
CCT4-204ENST00000544079 ICAM5Q9UMF0 924 aa16.78■□□□□ 0.28
CCT4-204ENST00000544079 NTNG1Q9Y2I2 539 aa16.78■□□□□ 0.28
CCT4-204ENST00000544079 OR10H1Q9Y4A9 318 aa16.78■□□□□ 0.28
CCT4-204ENST00000544079 COL4A3Q01955 1670 aa16.78■□□□□ 0.28
CCT4-204ENST00000544079 EFCAB7A8K855 629 aa16.77■□□□□ 0.28
CCT4-204ENST00000544079 NDUFS4O43181 175 aa16.77■□□□□ 0.28
CCT4-204ENST00000544079 PNLIPRP2P54317 469 aa16.77■□□□□ 0.28
CCT4-204ENST00000544079 TEAD2Q15562 447 aa16.77■□□□□ 0.28
CCT4-204ENST00000544079 NKAPLQ5M9Q1 402 aa16.77■□□□□ 0.28
CCT4-204ENST00000544079 Q6ZVL8 140 aa16.77■□□□□ 0.28
CCT4-204ENST00000544079 DND1Q8IYX4 353 aaKnown RBP16.77■□□□□ 0.28
CCT4-204ENST00000544079 OR4C6Q8NH72 309 aa16.77■□□□□ 0.28
CCT4-204ENST00000544079 CD99L2Q8TCZ2 262 aa16.77■□□□□ 0.28
CCT4-204ENST00000544079 ZNF285Q96NJ3 590 aa16.77■□□□□ 0.28
CCT4-204ENST00000544079 EXO5Q9H790 373 aa16.77■□□□□ 0.28
CCT4-204ENST00000544079 KCNE3Q9Y6H6 103 aa16.77■□□□□ 0.28
CCT4-204ENST00000544079 A0A0A6YYD5 115 aa16.77■□□□□ 0.27
CCT4-204ENST00000544079 MAKP20794 623 aa16.77■□□□□ 0.27
CCT4-204ENST00000544079 EIF2S3LQ2VIR3 472 aaKnown RBP16.77■□□□□ 0.27
CCT4-204ENST00000544079 RBMS3Q6XE24 437 aaKnown RBP16.77■□□□□ 0.27
CCT4-204ENST00000544079 NDUFAF7Q7L592 441 aa16.77■□□□□ 0.27
CCT4-204ENST00000544079 TAS1R1Q7RTX1 841 aa16.77■□□□□ 0.27
CCT4-204ENST00000544079 DUSP19Q8WTR2 217 aa16.77■□□□□ 0.27
CCT4-204ENST00000544079 TRMT2BQ96GJ1 504 aaKnown RBP16.77■□□□□ 0.27
CCT4-204ENST00000544079 TEX101Q9BY14 249 aa16.77■□□□□ 0.27
CCT4-204ENST00000544079 ZNF281Q9Y2X9 895 aa16.77■□□□□ 0.27
CCT4-204ENST00000544079 EMC8O43402 210 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 ACTL6AO96019 429 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 CAP1Q01518 475 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 CRMP1Q14194 572 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 RTP2Q5QGT7 225 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 LDLRAD1Q5T700 205 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 TMEM71Q6P5X7 295 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 PARGQ86W56 976 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 C17orf64Q86WR6 236 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 GTPBP8Q8N3Z3 284 aaPredicted RBP16.76■□□□□ 0.27
CCT4-204ENST00000544079 ZNF433Q8N7K0 673 aaPredicted RBP16.76■□□□□ 0.27
CCT4-204ENST00000544079 STEAP2Q8NFT2 490 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 EDARADDQ8WWZ3 215 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 ZG16BQ96DA0 208 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 PAPOLGQ9BWT3 736 aaKnown RBP16.76■□□□□ 0.27
CCT4-204ENST00000544079 SLITRK2Q9H156 845 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 SMCO4Q9NRQ5 59 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 UQCC1Q9NVA1 299 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 ZNF443Q9Y2A4 671 aaPredicted RBP16.76■□□□□ 0.27
CCT4-204ENST00000544079 MYADML2A6NDP7 307 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 ZNF729A6NN14 1252 aaPredicted RBP16.76■□□□□ 0.27
CCT4-204ENST00000544079 IFNGP01579 166 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 OR4E1P0C645 316 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 PTHLHP12272 177 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 DLSTP36957 453 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 STARD6P59095 220 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 RPS15P62841 145 aaKnown RBP16.76■□□□□ 0.27
CCT4-204ENST00000544079 REEP5Q00765 189 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 Q3ZCU0 254 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 FUT10Q6P4F1 479 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 GDPD4Q6W3E5 623 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 TMCO2Q7Z6W1 182 aaPredicted RBP16.76■□□□□ 0.27
CCT4-204ENST00000544079 SAMD14Q8IZD0 417 aaPredicted RBP16.76■□□□□ 0.27
CCT4-204ENST00000544079 CDK20Q8IZL9 346 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 C16orf58Q96GQ5 468 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 CNN2Q99439 309 aaKnown RBP16.76■□□□□ 0.27
CCT4-204ENST00000544079 SMAD5Q99717 465 aaKnown RBP16.76■□□□□ 0.27
CCT4-204ENST00000544079 SLC25A21Q9BQT8 299 aaPredicted RBP16.76■□□□□ 0.27
CCT4-204ENST00000544079 PCOLCE2Q9UKZ9 415 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 LRFN2Q9ULH4 789 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 SIGLEC7Q9Y286 467 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 ZNF337Q9Y3M9 751 aa16.76■□□□□ 0.27
CCT4-204ENST00000544079 TBC1D3EA0A087X179 549 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 PHYHO14832 338 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 HLA-GP17693 338 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 ITPKBP27987 946 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 PBLDP30039 288 aaPredicted RBP16.75■□□□□ 0.27
CCT4-204ENST00000544079 ADH7P40394 386 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 PMELP40967 661 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 CASRP41180 1078 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 CTSOP43234 321 aaPredicted RBP16.75■□□□□ 0.27
CCT4-204ENST00000544079 NAAAQ02083 359 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 EIPR1Q53HC9 387 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 UBE3DQ7Z6J8 389 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 RTN4RL1Q86UN2 441 aaPredicted RBP16.75■□□□□ 0.27
CCT4-204ENST00000544079 LRRTM4Q86VH4 590 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 RANBP3LQ86VV4 465 aaPredicted RBP16.75■□□□□ 0.27
CCT4-204ENST00000544079 ZNF561Q8N587 486 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 OR51S1Q8NGJ8 323 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 SNX33Q8WV41 574 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 TMEM239Q8WW34 195 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 LRIG1Q96JA1 1093 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 SFXN1Q9H9B4 322 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 MARCH5Q9NX47 278 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 GXYLT2A0PJZ3 443 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 GGT3PA6NGU5 568 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 TMEM200CA6NKL6 621 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 F8VVB4 439 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 F8VWA3 439 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 CD70P32970 193 aa16.75■□□□□ 0.27
CCT4-204ENST00000544079 INPP5JQ15735 1006 aaPredicted RBP16.75■□□□□ 0.27
CCT4-204ENST00000544079 LRRC73Q5JTD7 316 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms