RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 EXOC3L2Q2M3D2 409 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ZNF771Q7L3S4 317 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 HIST3H2AQ7L7L0 130 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 GPAT4Q86UL3 456 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 C10orf67Q8IYJ2 551 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 OR4K5Q8NGD3 323 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ZNF417Q8TAU3 575 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 PYDC1Q8WXC3 89 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 HIST1H2ACQ93077 130 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 BPIFA2Q96DR5 249 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ZFP3Q96NJ6 502 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ZNF587Q96SQ5 575 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 FKRPQ9H9S5 495 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CHST11Q9NPF2 352 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 KLHL9Q9P2J3 617 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SEC14L4Q9UDX3 406 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CLEC4AQ9UMR7 237 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CORINQ9Y5Q5 1042 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 LYVE1Q9Y5Y7 322 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SH3PXD2BA1X283 911 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 HTR3EA5X5Y0 456 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ZNF814B7Z6K7 855 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 OR10H3O60404 316 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 E2F6O75461 281 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 OR7A10O76100 309 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 IGF2P01344 180 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SAGP10523 405 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 FUT1P19526 365 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CEACAM8P31997 349 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CTBP2P56545 445 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ADORA2A-AS1P86434 159 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 PRKCDQ05655 676 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 PMS2P3Q13401 168 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SEC23BQ15437 767 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 TMEM201Q5SNT2 666 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 H1FNTQ75WM6 255 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 MEX3DQ86XN8 651 aaKnown RBP12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CCDC71Q8IV32 467 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 LRRC17Q8N6Y2 441 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CNEP1R1Q8N9A8 125 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 NAXEQ8NCW5 288 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 OR5J2Q8NH18 312 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SDCCAG3Q96C92 435 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 DUS3LQ96G46 650 aaKnown RBP12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 GMPPAQ96IJ6 420 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 GLRX2Q9NS18 164 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ARMC1Q9NVT9 282 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ZNF229Q9UJW7 825 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 RNF6Q9Y252 685 aa12.92□□□□□ -0.34
TNFRSF1A-216ENST00000543995 HNRNPRO43390 633 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ZG16O60844 167 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 RAMP1O60894 148 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ENTPD5O75356 428 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 DEAF1O75398 565 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 OR6A2O95222 327 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CTSSP25774 331 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 IFNGR2P38484 337 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 GPR4P46093 362 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 HMGA2P52926 109 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SIRPAP78324 504 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 FOXF2Q12947 444 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ABLIM2Q6H8Q1 611 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SLC46A3Q7Z3Q1 461 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 NANOGNBQ7Z5D8 188 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 TUSC5Q8IXB3 177 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SCAIQ8N9R8 606 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 FAM46AQ96IP4 442 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 PSD2Q9BQI7 771 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 FUZQ9BT04 418 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 VNN3Q9NY84 501 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 MRPL39Q9NYK5 338 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 EMC3Q9P0I2 261 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 DNAJB9Q9UBS3 223 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 TMEM5Q9Y2B1 443 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 B3GALT5Q9Y2C3 310 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 EMC9Q9Y3B6 208 aa12.91□□□□□ -0.34
TNFRSF1A-216ENST00000543995 EFCAB9A8MZ26 197 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 BLOC1S5-TXNDC5H3BN57 136 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CLOCKO15516 846 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CCNB2O95067 398 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 VAMP5O95183 116 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ADORA3P0DMS8 318 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 FCGR1AP12314 374 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 MAKP20794 623 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 BMP5P22003 454 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 AHCYP23526 432 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 FASP25445 335 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 OPRM1P35372 400 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 LIMS1P48059 325 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 LAPTM4AQ15012 233 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ZFP1Q6P2D0 407 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 MRGPRGQ86SM5 289 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 KDM8Q8N371 416 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 FAM26EQ8N5C1 309 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 OR4C15Q8NGM1 316 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ASB5Q8WWX0 329 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 STMN2Q93045 179 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ZNF775Q96BV0 537 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 RASD1Q9Y272 281 aa12.9□□□□□ -0.34
TNFRSF1A-216ENST00000543995 NCOA6Q14686 2063 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms