RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 SLC19A3Q9BZV2 496 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 C12orf49Q9H741 205 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 ENO4A6NNW6 628 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 ZNF724A8MTY0 619 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 A8MXE2 369 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 MSTNO14793 375 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 PIP5K1CO60331 668 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 CD8BP10966 210 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 GTF2E2P29084 291 aaKnown RBP13.41□□□□□ -0.26
CD9-210ENST00000543916 IFNA8P32881 189 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 LSM11P83369 360 aaKnown RBP eCLIP13.41□□□□□ -0.26
CD9-210ENST00000543916 TRAP1Q12931 704 aaKnown RBP13.41□□□□□ -0.26
CD9-210ENST00000543916 TRAM2Q15035 370 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 FBXL19-AS1Q494R0 122 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 HIST2H2BCQ6DN03 193 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 CYP4Z1Q86W10 505 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 C10orf53Q8N6V4 93 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 ZNF610Q8N9Z0 462 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 PIK3C3Q8NEB9 887 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 MCUR1Q96AQ8 359 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 SEPHS2Q99611 448 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 TACO1Q9BSH4 297 aaKnown RBP13.41□□□□□ -0.26
CD9-210ENST00000543916 LRMDAQ9H2I8 198 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 CHST11Q9NPF2 352 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 PLSCR4Q9NRQ2 329 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 C20orf141Q9NUB4 165 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.41□□□□□ -0.26
CD9-210ENST00000543916 PROCRQ9UNN8 238 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 FLVCR1Q9Y5Y0 555 aa13.41□□□□□ -0.26
CD9-210ENST00000543916 CH25HO95992 272 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 MT-ND1P03886 318 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 FABP3P05413 133 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 RHCEP18577 417 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 EDNRAP25101 427 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 NTF4P34130 210 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 ZNF74Q16587 644 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 ZNF474Q6S9Z5 364 aaPredicted RBP13.4□□□□□ -0.26
CD9-210ENST00000543916 CCDC121Q6ZUS5 278 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.4□□□□□ -0.26
CD9-210ENST00000543916 SLC46A3Q7Z3Q1 461 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 ZDHHC21Q8IVQ6 265 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 KDM8Q8N371 416 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 OR9K2Q8NGE7 335 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 RNASE6Q93091 150 aaKnown RBP13.4□□□□□ -0.26
CD9-210ENST00000543916 LRGUKQ96M69 825 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 HS6ST2Q96MM7 605 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 PIP5K1AQ99755 562 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 RBM24Q9BX46 236 aaKnown RBP13.4□□□□□ -0.26
CD9-210ENST00000543916 NMNAT1Q9HAN9 279 aaPredicted RBP13.4□□□□□ -0.26
CD9-210ENST00000543916 IL1RAPQ9NPH3 570 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 GALNT8Q9NY28 637 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 EMC3Q9P0I2 261 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 C6orf203Q9P0P8 240 aaPredicted RBP13.4□□□□□ -0.26
CD9-210ENST00000543916 SLC7A8Q9UHI5 535 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 POMPQ9Y244 141 aa13.4□□□□□ -0.26
CD9-210ENST00000543916 FAM32AQ9Y421 112 aaKnown RBP13.4□□□□□ -0.26
CD9-210ENST00000543916 A0A087WUU8 490 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 EBAG9O00559 213 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 GPR171O14626 319 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 MT-ATP6P00846 226 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 H1F0P07305 194 aaKnown RBP13.39□□□□□ -0.27
CD9-210ENST00000543916 ITGA2P17301 1181 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 UQCRC1P31930 480 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 MFSD13AQ14CX5 517 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 TMEM225Q6GV28 225 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 TFAP2EQ6VUC0 442 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 H1FNTQ75WM6 255 aaPredicted RBP13.39□□□□□ -0.27
CD9-210ENST00000543916 ASRGL1Q7L266 308 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 GALNT5Q7Z7M9 940 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 GPAT4Q86UL3 456 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 LRRC17Q8N6Y2 441 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 ZIC4Q8N9L1 334 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 ADPRHL1Q8NDY3 354 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 DHRS1Q96LJ7 313 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 SF3B5Q9BWJ5 86 aaKnown RBP13.39□□□□□ -0.27
CD9-210ENST00000543916 ASPNQ9BXN1 380 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 KLHL4Q9C0H6 718 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 FKRPQ9H9S5 495 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 MRPL39Q9NYK5 338 aaKnown RBP13.39□□□□□ -0.27
CD9-210ENST00000543916 B3GAT1Q9P2W7 334 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 RASD1Q9Y272 281 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 B3GALT5Q9Y2C3 310 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 NOSIPQ9Y314 301 aaKnown RBP13.39□□□□□ -0.27
CD9-210ENST00000543916 MED31Q9Y3C7 131 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 TESMINQ9Y4I5 508 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 CORINQ9Y5Q5 1042 aa13.39□□□□□ -0.27
CD9-210ENST00000543916 PTPN13Q12923 2485 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 ICE1Q9Y2F5 2266 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 A0A1W2PRQ8 180 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 MS4A18H0YCH9 400 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 VAMP5O95183 116 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 STAMBPO95630 424 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 HPRP00739 348 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 IGF2P01344 180 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 NQO1P15559 274 aaKnown RBP13.38□□□□□ -0.27
CD9-210ENST00000543916 IGFBP2P18065 325 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 MAGEA2P43356 314 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 OR3A2P47893 321 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 SNTB1Q13884 538 aaKnown RBP13.38□□□□□ -0.27
CD9-210ENST00000543916 DGCR6Q14129 220 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms