RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ACTA2P62736 377 aa15.53■□□□□ 0.08
PTPRO-209ENST00000543886 ACTG2P63267 376 aa15.53■□□□□ 0.08
PTPRO-209ENST00000543886 EFR3AQ14156 821 aa15.53■□□□□ 0.08
PTPRO-209ENST00000543886 TRAM1Q15629 374 aa15.53■□□□□ 0.08
PTPRO-209ENST00000543886 TOMM34Q15785 309 aaPredicted RBP15.53■□□□□ 0.08
PTPRO-209ENST00000543886 PRR23CQ6ZRP0 262 aa15.53■□□□□ 0.08
PTPRO-209ENST00000543886 MAML2Q8IZL2 1156 aaPredicted RBP15.53■□□□□ 0.08
PTPRO-209ENST00000543886 LSM14AQ8ND56 463 aaKnown RBP15.53■□□□□ 0.08
PTPRO-209ENST00000543886 Q96M85 177 aa15.53■□□□□ 0.08
PTPRO-209ENST00000543886 GFM1Q96RP9 751 aaKnown RBP15.53■□□□□ 0.08
PTPRO-209ENST00000543886 LPAR4Q99677 370 aa15.53■□□□□ 0.08
PTPRO-209ENST00000543886 SP140LQ9H930 580 aa15.53■□□□□ 0.08
PTPRO-209ENST00000543886 FKRPQ9H9S5 495 aa15.53■□□□□ 0.08
PTPRO-209ENST00000543886 SLC35F4A4IF30 521 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 PATE3B3GLJ2 98 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 E9PI62 339 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 P2RX1P51575 399 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 LTBQ06643 244 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 KRR1Q13601 381 aaKnown RBP15.52■□□□□ 0.08
PTPRO-209ENST00000543886 IL10RAQ13651 578 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 CCDC92Q53HC0 331 aaPredicted RBP15.52■□□□□ 0.08
PTPRO-209ENST00000543886 PAPD4Q6PIY7 484 aaKnown RBP15.52■□□□□ 0.08
PTPRO-209ENST00000543886 TMEM91Q6ZNR0 172 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 SSX6Q7RTT6 188 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 LRRC75AQ8NAA5 344 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 GALNT6Q8NCL4 622 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 APCDD1LQ8NCL9 501 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 NFAM1Q8NET5 270 aaPredicted RBP15.52■□□□□ 0.08
PTPRO-209ENST00000543886 ZPLD1Q8TCW7 415 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 TAAR8Q969N4 342 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 DDOQ99489 341 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 NMNAT2Q9BZQ4 307 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 TRAPPC4Q9Y296 219 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 NPFFR2Q9Y5X5 522 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 V9GYH0 126 aa15.52■□□□□ 0.08
PTPRO-209ENST00000543886 MPDZO75970 2070 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 IMPA2O14732 288 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 PLPP2O43688 288 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 TFP02787 698 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 SDHAP31040 664 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 PYCR1P32322 319 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 HOXD12P35452 270 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 POLR2HP52434 150 aaKnown RBP15.52■□□□□ 0.07
PTPRO-209ENST00000543886 HCCSP53701 268 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 CAV3P56539 151 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 RPL18Q07020 188 aaKnown RBP15.52■□□□□ 0.07
PTPRO-209ENST00000543886 SLC3A1Q07837 685 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 QPRTQ15274 297 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.52■□□□□ 0.07
PTPRO-209ENST00000543886 OR8H2Q8N162 312 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 SCAIQ8N9R8 606 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 CEP76Q8TAP6 659 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 MRPL48Q96GC5 212 aaKnown RBP15.52■□□□□ 0.07
PTPRO-209ENST00000543886 TTTY10Q9BZA0 68 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 APMAPQ9HDC9 416 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 GRHPRQ9UBQ7 328 aa15.52■□□□□ 0.07
PTPRO-209ENST00000543886 TRAV36DV7A0A075B6V5 113 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 TRBV11-1A0A0K0K1C0 115 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 PTTG1O95997 202 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 F13BP05160 661 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 SLC26A5P58743 744 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 E2F1Q01094 437 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 TP53I3Q53FA7 332 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 ZNF385CQ66K41 422 aaPredicted RBP15.51■□□□□ 0.07
PTPRO-209ENST00000543886 FAM122BQ7Z309 247 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 MISPQ8IVT2 679 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 CADM3Q8N126 398 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 RFLNBQ8N5W9 214 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 OR5J2Q8NH18 312 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 NUBPLQ8TB37 319 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 THAP3Q8WTV1 239 aaPredicted RBP15.51■□□□□ 0.07
PTPRO-209ENST00000543886 SNX33Q8WV41 574 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 ZC3H10Q96K80 434 aaKnown RBP15.51■□□□□ 0.07
PTPRO-209ENST00000543886 SDHCQ99643 169 aaPredicted RBP15.51■□□□□ 0.07
PTPRO-209ENST00000543886 MESP1Q9BRJ9 268 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 RPRD1BQ9NQG5 326 aaKnown RBP15.51■□□□□ 0.07
PTPRO-209ENST00000543886 OCIAD1Q9NX40 245 aa15.51■□□□□ 0.07
PTPRO-209ENST00000543886 VSTM2BA6NLU5 285 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 GLCEO94923 617 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 DLGAP3O95886 979 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 ONECUT2O95948 504 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 CDKN2AP42771 156 aaKnown RBP15.5■□□□□ 0.07
PTPRO-209ENST00000543886 DUSP3P51452 185 aaPredicted RBP15.5■□□□□ 0.07
PTPRO-209ENST00000543886 GBX2P52951 348 aaPredicted RBP15.5■□□□□ 0.07
PTPRO-209ENST00000543886 SLC25A1P53007 311 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 CLPPQ16740 277 aaPredicted RBP15.5■□□□□ 0.07
PTPRO-209ENST00000543886 TRIM61Q5EBN2 209 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 EMC4Q5J8M3 183 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 FAM131AQ6UXB0 335 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 C16orf47Q6ZP98 133 aaPredicted RBP15.5■□□□□ 0.07
PTPRO-209ENST00000543886 SYS1Q8N2H4 156 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 DUSP19Q8WTR2 217 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 DIRAS2Q96HU8 199 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 CTRCQ99895 268 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 CRB3Q9BUF7 120 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 MIXL1Q9H2W2 232 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 CPNE5Q9HCH3 593 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 C14orf119Q9NWQ9 140 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 TMED7-TICAM2A0A0A6YYA0 188 aa15.5■□□□□ 0.07
PTPRO-209ENST00000543886 SUSD5O60279 629 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms