RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 TMEM182Q6ZP80 229 aaPredicted RBP8.21□□□□□ -1.09
VPS13D-212ENST00000543766 OR13C9Q8NGT0 318 aa8.21□□□□□ -1.09
VPS13D-212ENST00000543766 DUSP15Q9H1R2 295 aaPredicted RBP8.21□□□□□ -1.09
VPS13D-212ENST00000543766 NECTIN3Q9NQS3 549 aa8.21□□□□□ -1.09
VPS13D-212ENST00000543766 SERGEFQ9UGK8 458 aa8.21□□□□□ -1.09
VPS13D-212ENST00000543766 SUSD2Q9UGT4 822 aa8.21□□□□□ -1.09
VPS13D-212ENST00000543766 OR5H14A6NHG9 310 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 IFNL4K9M1U5 179 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 PPP1R11O60927 126 aaPredicted RBP8.21□□□□□ -1.1
VPS13D-212ENST00000543766 UQCRC2P22695 453 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 CHRNB4P30926 498 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 RAB7AP51149 207 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 GABARAPL2P60520 117 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 ADPRMQ3LIE5 342 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 HENMT1Q5T8I9 393 aaKnown RBP8.21□□□□□ -1.1
VPS13D-212ENST00000543766 CPEB2Q7Z5Q1 589 aaKnown RBP8.21□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF100Q8IYN0 542 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 OR8I2Q8N0Y5 310 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 C2orf73Q8N5S3 287 aaPredicted RBP8.21□□□□□ -1.1
VPS13D-212ENST00000543766 TTC16Q8NEE8 873 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 HMGCLL1Q8TB92 370 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 SLC45A3Q96JT2 553 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 OR52E6Q96RD3 313 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 TPSD1Q9BZJ3 242 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 TMEM181Q9P2C4 612 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 WNT16Q9UBV4 365 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.21□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF587BE7ETH6 402 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 K7EPK0 472 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 NRP1O14786 923 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 CCL25O15444 150 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 XRCC2O43543 280 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 DUX1O43812 170 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 FARS2O95363 451 aaKnown RBP8.21□□□□□ -1.1
VPS13D-212ENST00000543766 KLF8O95600 359 aaPredicted RBP8.21□□□□□ -1.1
VPS13D-212ENST00000543766 CDS2O95674 445 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 EDN2P20800 178 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 CRHBPP24387 322 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 GJA5P36382 358 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 GSK3BP49841 420 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 CRISP1P54107 249 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 HTR4Q13639 388 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 PNCKQ6P2M8 343 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 FIGNL1Q6PIW4 674 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 DLEU7Q6UYE1 221 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 TMEM130Q8N3G9 435 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 FAM71E2Q8N5Q1 922 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 OR52N4Q8NGI2 321 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 FEZF2Q8TBJ5 459 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 MRPS31Q92665 395 aaKnown RBP8.21□□□□□ -1.1
VPS13D-212ENST00000543766 ISL2Q96A47 359 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 YIPF6Q96EC8 236 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 DUX5Q96PT3 197 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 RBP7Q96R05 134 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 TRMT61BQ9BVS5 477 aaKnown RBP8.21□□□□□ -1.1
VPS13D-212ENST00000543766 TKTL2Q9H0I9 626 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 C20orf85Q9H1P6 137 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 B3GAT1Q9P2W7 334 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 KIF25Q9UIL4 384 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 FKBPLQ9UIM3 349 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 OSGIN1Q9UJX0 560 aa8.21□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF346Q9UL40 294 aaKnown RBP8.21□□□□□ -1.1
VPS13D-212ENST00000543766 EXOSC1Q9Y3B2 195 aaKnown RBP8.21□□□□□ -1.1
VPS13D-212ENST00000543766 TMEM184BQ9Y519 407 aaPredicted RBP8.21□□□□□ -1.1
VPS13D-212ENST00000543766 CCDC187A0A096LP49 1063 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 PRORSD1PA6NEY8 169 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 WIPF3A6NGB9 483 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 PNLIPRP1P54315 467 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 SGCBQ16585 318 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 C5orf47Q569G3 176 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 DCST2Q5T1A1 773 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 PHF19Q5T6S3 580 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 H3F3CQ6NXT2 135 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 FTMTQ8N4E7 242 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 OR4F15Q8NGB8 312 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 OR13J1Q8NGT2 312 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 RPUSD4Q96CM3 377 aaKnown RBP8.2□□□□□ -1.1
VPS13D-212ENST00000543766 TSSK3Q96PN8 268 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF300Q96RE9 604 aaPredicted RBP8.2□□□□□ -1.1
VPS13D-212ENST00000543766 NXF2Q9GZY0 626 aaKnown RBP8.2□□□□□ -1.1
VPS13D-212ENST00000543766 AKIRIN1Q9H9L7 192 aaPredicted RBP8.2□□□□□ -1.1
VPS13D-212ENST00000543766 SEMA5BQ9P283 1151 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 COL2A1P02458 1487 aaPredicted RBP8.2□□□□□ -1.1
VPS13D-212ENST00000543766 CNTNAP1P78357 1384 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 IGKV6D-41A0A0C4DH26 115 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 FAM170BA6NMN3 283 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 HEPACAM2A8MVW5 462 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 A8MWP6 167 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 KDELR3O43731 214 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 F12P00748 615 aaPredicted RBP8.2□□□□□ -1.1
VPS13D-212ENST00000543766 PSMB5P28074 263 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 LBX1P52954 281 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 PPIAP62937 165 aaKnown RBP8.2□□□□□ -1.1
VPS13D-212ENST00000543766 DPYSL3Q14195 570 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 IL11RAQ14626 422 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 MFSD10Q14728 455 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 SFRP5Q5T4F7 317 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 LAIR2Q6ISS4 152 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 DRAM2Q6UX65 266 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 CD300LGQ6UXG3 332 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms