RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 OR10T2Q8NGX3 314 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 BLOC1S5Q8TDH9 187 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 LIPHQ8WWY8 451 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 TMBIM1Q969X1 311 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 C18orf25Q96B23 403 aaPredicted RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 ZNF689Q96CS4 500 aaPredicted RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 MRPL53Q96EL3 112 aaKnown RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 SGTBQ96EQ0 304 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 C18orf12Q96KH6 178 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 OR5M11Q96RB7 305 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 SERPINI1Q99574 410 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 DOK1Q99704 481 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 AGPAT1Q99943 283 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 ACBD6Q9BR61 282 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 C2orf88Q9BSF0 95 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 TMED9Q9BVK6 235 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 FUNDC2Q9BWH2 189 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 TBC1D10AQ9BXI6 508 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 EGLN1Q9GZT9 426 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 WWP1Q9H0M0 922 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 OPN3Q9H1Y3 402 aaPredicted RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 OR51B6Q9H340 312 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 MED20Q9H944 212 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 ACTR8Q9H981 624 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 CYP3A43Q9HB55 503 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 HMG20AQ9NP66 347 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 ADAP2Q9NPF8 381 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 BIN3Q9NQY0 253 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 NRBP2Q9NSY0 501 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 TEX10Q9NXF1 929 aaPredicted RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 ERVK-18Q9QC07 812 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 DCDC2Q9UHG0 476 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 BCAP29Q9UHQ4 241 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 ZNF221Q9UK13 617 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 ZNF490Q9ULM2 529 aaPredicted RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 RAB26Q9ULW5 256 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 COPS3Q9UNS2 423 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 TP53TG5Q9Y2B4 290 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 HYOU1Q9Y4L1 999 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 UGT2A1Q9Y4X1 527 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 AP4S1Q9Y587 144 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 MYH7P12883 1935 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 SETD1AO15047 1707 aaKnown RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 ABCC3O15438 1527 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 WDR62O43379 1518 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 SF3B1O75533 1304 aaKnown RBP eCLIP2.73□□□□□ -1.978e-6■■■■■ 107
USP28-210ENST00000542033 ADGRA3Q8IWK6 1321 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CUL7Q14999 1698 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 MED14O60244 1454 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 IQSEC2Q5JU85 1478 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 MLH3Q9UHC1 1453 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 KDM6BO15054 1643 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 A0A087WZ39 114 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 TRBV4-1A0A0J9YWV2 114 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 MFSD2BA6NFX1 497 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 YJEFN3A6XGL0 299 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 ANKRD30BLA7E2S9 258 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 LEUTXA8MZ59 168 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 I3L4J1 428 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 LGALS8O00214 317 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 PHYHO14832 338 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 MLNRO43193 412 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CHP2O43745 196 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 TLX2O43763 284 aaPredicted RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 PRKYO43930 277 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 DPM1O60762 260 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CSO75390 466 aaKnown RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 SAP30O75446 220 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 BANF1O75531 89 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 STX11O75558 287 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 RHBDL1O75783 438 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 SORBS2O94875 1100 aaKnown RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 TBX6O95947 436 aaPredicted RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 F10P00742 488 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CRYGCP07315 174 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 GP1BAP07359 652 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CD3GP09693 182 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 MBL2P11226 248 aaPredicted RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 RNH1P13489 461 aaKnown RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 GP9P14770 177 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 SPI1P17947 270 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 UGT1A4P22310 534 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CALML3P27482 149 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 PSMB6P28072 239 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 LAP3P28838 519 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CD1BP29016 333 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 IL12AP29459 219 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 PPP2R1BP30154 601 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 OTX2P32243 289 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 RORAP35398 523 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 UGT1A5P35504 534 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 GPX4P36969 197 aaPredicted RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 DDOSTP39656 456 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CEACAM6P40199 344 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 SOX3P41225 446 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CDKN2CP42773 168 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CRATP43155 626 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 MAGEA2P43356 314 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 OR3A2P47893 321 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 PSMD8P48556 350 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms