RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 LIMS4P0CW20 117 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 DRD3P35462 400 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 TPMTP51580 245 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 MVDP53602 400 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 METAP1DQ6UB28 335 aaPredicted RBP13.37□□□□□ -0.27
GCFC2-211ENST00000541687 PNLDC1Q8NA58 520 aaKnown RBP13.37□□□□□ -0.27
GCFC2-211ENST00000541687 NXPE2Q96DL1 559 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 SYT4Q9H2B2 425 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 C20orf141Q9NUB4 165 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 LRIT1Q9P2V4 623 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 C19orf53Q9UNZ5 99 aaPredicted RBP13.37□□□□□ -0.27
GCFC2-211ENST00000541687 A0A1B0GVI7 797 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 TSPAN11A1L157 253 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 HEXBP07686 556 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 ST6GAL1P15907 406 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 RAB11BQ15907 218 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 PRSS53Q2L4Q9 553 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 COL28A1Q2UY09 1125 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 MED25Q71SY5 747 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 RASGRP3Q8IV61 690 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 ZNF584Q8IVC4 421 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 OR4N2Q8NGD1 307 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 OR13C3Q8NGS6 347 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 OR51Q1Q8NH59 317 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 MAFIPQ8WZ33 124 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 TMEM106AQ96A25 262 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 WFDC6Q9BQY6 131 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 NOX3Q9HBY0 568 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 QPCTLQ9NXS2 382 aa13.37□□□□□ -0.27
GCFC2-211ENST00000541687 DRD1P21728 446 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 RBMS1P29558 406 aaKnown RBP13.36□□□□□ -0.27
GCFC2-211ENST00000541687 DDOSTP39656 456 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 EVX1P49640 407 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 RAB38P57729 211 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 DGCR2P98153 550 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 VASH1Q7L8A9 365 aaPredicted RBP13.36□□□□□ -0.27
GCFC2-211ENST00000541687 TPRA1Q86W33 373 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 ZNF440Q8IYI8 595 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 KDM8Q8N371 416 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 WDR34Q96EX3 536 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 HIST1H2AAQ96QV6 131 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 INTS14Q96SY0 518 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 OR10A5Q9H207 317 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 ZMAT3Q9HA38 289 aaKnown RBP13.36□□□□□ -0.27
GCFC2-211ENST00000541687 FBXL4Q9UKA2 621 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 SERINC4A6NH21 518 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 KDM4EB2RXH2 506 aaPredicted RBP13.36□□□□□ -0.27
GCFC2-211ENST00000541687 GOSR2O14653 212 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 DPM1O60762 260 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 APEHP13798 732 aaKnown RBP13.36□□□□□ -0.27
GCFC2-211ENST00000541687 TACR3P29371 465 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 PRSS3P35030 304 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 RGS19P49795 217 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 BTG2P78543 158 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 FAM109BQ6ICB4 259 aaPredicted RBP13.36□□□□□ -0.27
GCFC2-211ENST00000541687 BOLLQ8N9W6 283 aaKnown RBP13.36□□□□□ -0.27
GCFC2-211ENST00000541687 DNAAF1Q8NEP3 725 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 ZNF707Q96C28 371 aaPredicted RBP13.36□□□□□ -0.27
GCFC2-211ENST00000541687 ANKRD19PQ9H560 264 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 INPP5EQ9NRR6 644 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 REV1Q9UBZ9 1251 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 ZNF638Q14966 1978 aaKnown RBP13.36□□□□□ -0.27
GCFC2-211ENST00000541687 TMEM221A6NGB7 291 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 SSX5O60225 188 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 OR2T7P0C7T2 308 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 VEGFCP49767 419 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 ZNF41P51814 821 aaPredicted RBP13.36□□□□□ -0.27
GCFC2-211ENST00000541687 ARHGAP11BQ3KRB8 267 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 FAM69BQ5VUD6 431 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 NKAIN2Q5VXU1 208 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 SLC18B1Q6NT16 456 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 RPL22L1Q6P5R6 122 aaKnown RBP13.36□□□□□ -0.27
GCFC2-211ENST00000541687 OR2T27Q8NH04 317 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 GPA33Q99795 319 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 GON7Q9BXV9 100 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 UBQLN4Q9NRR5 601 aa13.36□□□□□ -0.27
GCFC2-211ENST00000541687 LINC01565O15544 149 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 HLA-DMAP28067 261 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 EVI2BP34910 448 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 RPL35P42766 123 aaKnown RBP13.35□□□□□ -0.27
GCFC2-211ENST00000541687 GALEQ14376 348 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 SGCAQ16586 387 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 COMMD7Q86VX2 200 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 FAM160A2Q8N612 972 aaPredicted RBP13.35□□□□□ -0.27
GCFC2-211ENST00000541687 ZNF283Q8N7M2 679 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 OR5T2Q8NGG2 359 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 BRIX1Q8TDN6 353 aaKnown RBP13.35□□□□□ -0.27
GCFC2-211ENST00000541687 PRDM9Q9NQV7 894 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 ABRACLQ9P1F3 81 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 ZNF281Q9Y2X9 895 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 C2orf72A6NCS6 295 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 SPDEFO95238 335 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 EIF4EP06730 217 aaKnown RBP13.35□□□□□ -0.27
GCFC2-211ENST00000541687 PNMTP11086 282 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 NPR2P20594 1047 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 SPOCK1Q08629 439 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 EIF2B1Q14232 305 aaKnown RBP13.35□□□□□ -0.27
GCFC2-211ENST00000541687 VASNQ6EMK4 673 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 BAIAP2L2Q6UXY1 529 aa13.35□□□□□ -0.27
GCFC2-211ENST00000541687 C19orf47Q8N9M1 422 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms