RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 TFP02787 698 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 ATP1B1P05026 303 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 PCCBP05166 539 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 OR2T7P0C7T2 308 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 CD8BP10966 210 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 ERGP11308 486 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 PRG2P13727 222 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 NME1P15531 152 aaKnown RBP9.57□□□□□ -0.88
CHFR-219ENST00000541341 RABIFP47224 123 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 CAPZA1P52907 286 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 CDK3Q00526 305 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 NR0B2Q15466 257 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 HSPB2Q16082 182 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 NDUFAF6Q330K2 333 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 RPS26P11Q5JNZ5 115 aaPredicted RBP9.57□□□□□ -0.88
CHFR-219ENST00000541341 ARHGAP11AQ6P4F7 1023 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 ZCCHC12Q6PEW1 402 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 GLDNQ6ZMI3 551 aaPredicted RBP9.57□□□□□ -0.88
CHFR-219ENST00000541341 KRT77Q7Z794 578 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 SIAH3Q8IW03 269 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 SLC35F3Q8IY50 421 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 TIGD4Q8IY51 512 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 CFAP206Q8IYR0 622 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 GPR135Q8IZ08 494 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 LNX2Q8N448 690 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 RNF175Q8N4F7 328 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 IQCF1Q8N6M8 205 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 OR6T1Q8NGN1 323 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 OR2T27Q8NH04 317 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 ZNF671Q8TAW3 534 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 PHYHIPLQ96FC7 376 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 SCARF2Q96GP6 870 aaPredicted RBP9.57□□□□□ -0.88
CHFR-219ENST00000541341 SENP5Q96HI0 755 aaPredicted RBP9.57□□□□□ -0.88
CHFR-219ENST00000541341 AMDHD1Q96NU7 426 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 RBP7Q96R05 134 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 OR2A7Q96R45 310 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 CCDC3Q9BQI4 270 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 ACTRT3Q9BYD9 372 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 RBCK1Q9BYM8 510 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 C20orf85Q9H1P6 137 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 MVB12BQ9H7P6 319 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 NPDC1Q9NQX5 325 aaPredicted RBP9.57□□□□□ -0.88
CHFR-219ENST00000541341 POLE3Q9NRF9 147 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 CMC2Q9NRP2 79 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 PHPT1Q9NRX4 125 aaPredicted RBP9.57□□□□□ -0.88
CHFR-219ENST00000541341 SIRT3Q9NTG7 399 aaPredicted RBP9.57□□□□□ -0.88
CHFR-219ENST00000541341 SLC39A1Q9NY26 324 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 APOBEC3BQ9UH17 382 aaKnown RBP9.57□□□□□ -0.88
CHFR-219ENST00000541341 SLC35A3Q9Y2D2 325 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 ZNF780BQ9Y6R6 833 aa9.57□□□□□ -0.88
CHFR-219ENST00000541341 ZNF462Q96JM2 2506 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 PIEZO2Q9H5I5 2752 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 SLC9B1P1A6NJY1 282 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 MPTX1A8MV57 137 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 TNFRSF10CO14798 259 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 OGG1O15527 345 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 KLF4O43474 513 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 GP1BAP07359 652 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 GUSBP08236 651 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 TACSTD2P09758 323 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 UBBP0CG47 229 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 UBCP0CG48 685 aaKnown RBP9.56□□□□□ -0.88
CHFR-219ENST00000541341 BTCP35070 178 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 AHRP35869 848 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 GCGRP47871 477 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 NCBP2P52298 156 aaKnown RBP eCLIP9.56□□□□□ -0.882e-7■□□□□ 9.6
CHFR-219ENST00000541341 PSMA6P60900 246 aaKnown RBP9.56□□□□□ -0.88
CHFR-219ENST00000541341 RPS27AP62979 156 aaKnown RBP9.56□□□□□ -0.88
CHFR-219ENST00000541341 UBA52P62987 128 aaKnown RBP9.56□□□□□ -0.88
CHFR-219ENST00000541341 POU6F2P78424 691 aaPredicted RBP9.56□□□□□ -0.88
CHFR-219ENST00000541341 STX4Q12846 297 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 KLF9Q13886 244 aaPredicted RBP9.56□□□□□ -0.88
CHFR-219ENST00000541341 GK2Q14410 553 aaPredicted RBP9.56□□□□□ -0.88
CHFR-219ENST00000541341 NFATC4Q14934 902 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 POU4F3Q15319 338 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 TGIF1Q15583 401 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 SYPL1Q16563 259 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 CYP27C1Q4G0S4 372 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 ACSM3Q53FZ2 586 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 TCTE1Q5JU00 501 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 SLC35D3Q5M8T2 416 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 SLC6A19Q695T7 634 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 LPCAT3Q6P1A2 487 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 NIPAL3Q6P499 406 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 TFAP2EQ6VUC0 442 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 UTS2BQ765I0 119 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 SFTPA2Q8IWL1 248 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 RAB8BQ92930 207 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 TSACCQ96A04 125 aaPredicted RBP9.56□□□□□ -0.88
CHFR-219ENST00000541341 EXOSC8Q96B26 276 aaKnown RBP9.56□□□□□ -0.88
CHFR-219ENST00000541341 ORAI1Q96D31 301 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 SLC41A3Q96GZ6 507 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 SLC46A1Q96NT5 459 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 MNTQ99583 582 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 MCHR1Q99705 422 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 LRRC61Q9BV99 259 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 DUSP23Q9BVJ7 150 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 ZNF416Q9BWM5 594 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 LGR4Q9BXB1 951 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 NRIP3Q9NQ35 241 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms