RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 NARFLQ9H6Q4 476 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 SLC39A1Q9NY26 324 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 CDH10Q9Y6N8 788 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 PMS2P1A4D2B8 440 aa13.96□□□□□ -0.18
CLPTM1-202ENST00000541297 TRAPPC13A5PLN9 417 aa13.96□□□□□ -0.18
CLPTM1-202ENST00000541297 ZNF806P0C7X5 589 aa13.96□□□□□ -0.18
CLPTM1-202ENST00000541297 MC2RQ01718 297 aa13.96□□□□□ -0.18
CLPTM1-202ENST00000541297 METAP1DQ6UB28 335 aaPredicted RBP13.96□□□□□ -0.18
CLPTM1-202ENST00000541297 C9orf62Q8N4C0 152 aa13.96□□□□□ -0.18
CLPTM1-202ENST00000541297 ACOT11Q8WXI4 607 aaPredicted RBP13.96□□□□□ -0.18
CLPTM1-202ENST00000541297 NACC2Q96BF6 587 aa13.96□□□□□ -0.18
CLPTM1-202ENST00000541297 ARHGAP9Q9BRR9 750 aa13.96□□□□□ -0.18
CLPTM1-202ENST00000541297 CELSR3Q9NYQ7 3312 aa13.96□□□□□ -0.18
CLPTM1-202ENST00000541297 SYNDIG1LA6NDD5 238 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 VSTM2BA6NLU5 285 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 FABP7O15540 132 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 REM1O75628 298 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 CSTAP01040 98 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 LIMS3P0CW19 117 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 LIMS4P0CW20 117 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 HPGDP15428 266 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 CDK5Q00535 292 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 RAB40BQ12829 278 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 CD200R1LQ6Q8B3 271 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 OR4M2Q8NGB6 313 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 MR1Q95460 341 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 CMKLR1Q99788 373 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 PRSS27Q9BQR3 290 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 TRAF4Q9BUZ4 470 aaPredicted RBP13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 EGLN3Q9H6Z9 239 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 FGF20Q9NP95 211 aaPredicted RBP13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 DIABLOQ9NR28 239 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 EP300Q09472 2414 aaPredicted RBP13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 TRDV1A0A1B0GX56 115 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 SERINC4A6NH21 518 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 IL33O95760 270 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 FAM205BPQ63HN1 556 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 TRILQ7L0X0 811 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 LINC00471Q8N535 108 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 SPERTQ8NA61 448 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 HYLS1Q96M11 299 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 SPEF1Q9Y4P9 236 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 B3GALT1Q9Y5Z6 326 aa13.95□□□□□ -0.18
CLPTM1-202ENST00000541297 GMFGO60234 142 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 UTS2O95399 124 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 ACAA2P42765 397 aaKnown RBP13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 OMPP47874 163 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 MTNR1AP48039 350 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 GPR143P51810 404 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 COX10Q12887 443 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 CD226Q15762 336 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 PAPD4Q6PIY7 484 aaKnown RBP13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 APOOLQ6UXV4 268 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 B3GLCTQ6Y288 498 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 KIF18BQ86Y91 864 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 MARCH9Q86YJ5 346 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 TIGD4Q8IY51 512 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 PFN4Q8NHR9 129 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 PIGXQ8TBF5 258 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 ANKRD19PQ9H560 264 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 B3GNT2Q9NY97 397 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 KCNN3Q9UGI6 736 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 ZNF223Q9UK11 482 aaPredicted RBP13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 C4orf47A7E2U8 309 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 GTPBP1O00178 669 aaKnown RBP13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 SHOXO15266 292 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 PRODHO43272 600 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 ICOSLGO75144 302 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 KLK3P07288 261 aaPredicted RBP13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 GUSBP08236 651 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 M6PRP20645 277 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 IL12BP29460 328 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 SMSP52788 366 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 AP2S1P53680 142 aaPredicted RBP13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 PLCXD2Q0VAA5 305 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 TOR2AQ5JU69 321 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 ZBTB37Q5TC79 503 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 MRPL14Q6P1L8 145 aaKnown RBP13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 GRAMD2AQ8IUY3 354 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 DTX3Q8N9I9 347 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 SUMF1Q8NBK3 374 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 APCDD1LQ8NCL9 501 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 C7orf57Q8NEG2 295 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 NEIL3Q8TAT5 605 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 PHOSPHO1Q8TCT1 267 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 ZNF559Q9BR84 538 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 TMEM27Q9HBJ8 222 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 ISYNA1Q9NPH2 558 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 TMEM9BQ9NQ34 198 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 UBQLN4Q9NRR5 601 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 MRPS18AQ9NVS2 196 aaKnown RBP13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 FBXO9Q9UK97 447 aaPredicted RBP13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 PCNX3Q9H6A9 2034 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 MPDZO75970 2070 aa13.94□□□□□ -0.18
CLPTM1-202ENST00000541297 A0A0A6YYJ9 748 aa13.93□□□□□ -0.18
CLPTM1-202ENST00000541297 GNB5O14775 395 aa13.93□□□□□ -0.18
CLPTM1-202ENST00000541297 FUT1P19526 365 aa13.93□□□□□ -0.18
CLPTM1-202ENST00000541297 CELP19835 753 aa13.93□□□□□ -0.18
CLPTM1-202ENST00000541297 ABCD3P28288 659 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms