RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	ANKK1	Q8NFD2	765 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	LRRC8C	Q8TDW0	803 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SPDL1	Q96EA4	605 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	TAPBPL	Q9BX59	468 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	REG4	Q9BYZ8	158 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	LINC00470	Q9BZP3	86 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ALG2	Q9H553	416 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	TMEM38A	Q9H6F2	299 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	BARX1	Q9HBU1	254 aa	Predicted RBP	11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	OBP2B	Q9NPH6	170 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CBLN4	Q9NTU7	201 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	VAPA	Q9P0L0	249 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	NDUFS7	O75251	213 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ZNF432	O94892	652 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ACVR1B	P36896	505 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	PRPS1	P60891	318 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	STX1B	P61266	288 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SPOCK1	Q08629	439 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ADRM1	Q16186	407 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	C3orf36	Q3SXR2	165 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	TTMP	Q5BVD1	217 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	REEP3	Q6NUK4	255 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	C5orf46	Q6UWT4	87 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	DLEU7	Q6UYE1	221 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	B3GLCT	Q6Y288	498 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	PRIMA1	Q86XR5	153 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	OR10H5	Q8NGA6	315 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CCDC167	Q9P0B6	97 aa		11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CRNN	Q9UBG3	495 aa	Predicted RBP	11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	GDF2	Q9UK05	429 aa	Predicted RBP	11.47	□□□□□ -0.57
SEMA4D-223	ENST00000540475	FBN1	P35555	2871 aa	Known RBP	11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475		A0A096LNT2	108 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475		A0A1W2PR80	420 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	RNF223	E7ERA6	249 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	RPL36A-HNRNPH2	H7BZ11	118 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475		H7C417	338 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	OR2T1	O43869	369 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	PNMT	P11086	282 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	HOXB1	P14653	301 aa	Predicted RBP	11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	NCF2	P19878	526 aa	Predicted RBP	11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	HTR2A	P28223	471 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SELENOP	P49908	381 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	AQP5	P55064	265 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CDK6	Q00534	326 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	VEZF1	Q14119	521 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	GCNT6	Q5T4J0	391 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	FAM91A1	Q658Y4	838 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SLC22A25	Q6T423	547 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	NHLRC1	Q6VVB1	395 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	LINGO2	Q7L985	606 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	NET1	Q7Z628	596 aa	Predicted RBP	11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	GPAT4	Q86UL3	456 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	COMTD1	Q86VU5	262 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	DEPDC4	Q8N2C3	294 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	MUC15	Q8N387	334 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	FAM169B	Q8N8A8	192 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	OR6S1	Q8NH40	331 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SLC38A4	Q969I6	547 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	KTI12	Q96EK9	354 aa	Predicted RBP	11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	IKZF5	Q9H5V7	419 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ZNF385D	Q9H6B1	395 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	EVA1A	Q9H8M9	152 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CACYBP	Q9HB71	228 aa	Known RBP	11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ADPRHL2	Q9NX46	363 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	B3GAT1	Q9P2W7	334 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	RCE1	Q9Y256	329 aa		11.46	□□□□□ -0.57
SEMA4D-223	ENST00000540475	IGKV1D-42	A0A075B6H8	117 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ARPC4-TTLL3	A0A0A6YYG9	625 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	C5orf58	C9J3I9	102 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	INAFM1	C9JVW0	142 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475		M0R1B8	84 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	TPST1	O60507	370 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	AHSA1	O95433	338 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	WNT11	O96014	354 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	APOBEC3A	P31941	199 aa	Predicted RBP	11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	DSCR9	P59020	149 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	HOXC5	Q00444	222 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SQLE	Q14534	574 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SWI5	Q1ZZU3	235 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	RUNDC3A	Q59EK9	446 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	FBXL14	Q8N1E6	418 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	DPP10	Q8N608	796 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ADPRHL1	Q8NDY3	354 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	OR1K1	Q8NGR3	316 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	NFKBID	Q8NI38	313 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	BCL2L2	Q92843	193 aa	Predicted RBP	11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	TAAR8	Q969N4	342 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ADAD1	Q96M93	576 aa	Known RBP	11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	OXGR1	Q96P68	337 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SPATA5L1	Q9BVQ7	753 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CACNG6	Q9BXT2	260 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	NELFA	Q9H3P2	528 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	FKRP	Q9H9S5	495 aa		11.45	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CORO2B	Q9UQ03	480 aa		11.45	□□□□□ -0.58

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