RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 B4GALT6Q9UBX8 382 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 IL20RAQ9UHF4 553 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 LHX6Q9UPM6 363 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 NOP16Q9Y3C1 178 aaKnown RBP8.03□□□□□ -1.12
DDB1-217ENST00000540166 THADAQ6YHU6 1953 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 ARRDC5A6NEK1 342 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 PAPLNO95428 1278 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 FAM157BP0CG42 384 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 ARAFP10398 606 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 ACHEP22303 614 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 KCNJ5P48544 419 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 RNF144AP50876 292 aaPredicted RBP8.03□□□□□ -1.12
DDB1-217ENST00000540166 EPHA4P54764 986 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 HEPHL1Q6MZM0 1159 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 BEND4Q6ZU67 534 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 Q6ZVL8 140 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 LRRC56Q8IYG6 542 aaPredicted RBP8.03□□□□□ -1.12
DDB1-217ENST00000540166 SLC7A13Q8TCU3 470 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 UBTD2Q8WUN7 234 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 SNX33Q8WV41 574 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 ASB11Q8WXH4 323 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 ARRDC3Q96B67 414 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 ENKD1Q9H0I2 346 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 IL21RQ9HBE5 538 aa8.03□□□□□ -1.12
DDB1-217ENST00000540166 FGF20Q9NP95 211 aaPredicted RBP8.03□□□□□ -1.12
DDB1-217ENST00000540166 KIAA1671Q9BY89 1806 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 AQP8O94778 261 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 ADRA2AP08913 450 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 CD63P08962 238 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 MRPL3P09001 348 aaKnown RBP8.02□□□□□ -1.12
DDB1-217ENST00000540166 MMP15P51511 669 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 HMGA2P52926 109 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 TMEM220Q6QAJ8 160 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 HMGN2P46Q86SG4 172 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 JAZF1Q86VZ6 243 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 L3MBTL4Q8NA19 623 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 GLYATL2Q8WU03 294 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 TSACCQ96A04 125 aaPredicted RBP8.02□□□□□ -1.12
DDB1-217ENST00000540166 NUS1Q96E22 293 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 C14orf79Q96F83 325 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 TTTY10Q9BZA0 68 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 OR51M1Q9H341 326 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 AUNIPQ9H7T9 357 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 RPS10P5Q9NQ39 176 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 COA4Q9NYJ1 87 aa8.02□□□□□ -1.12
DDB1-217ENST00000540166 VWA8A3KMH1 1905 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 TMEM200CA6NKL6 621 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 NDUFS6O75380 124 aaKnown RBP8.02□□□□□ -1.13
DDB1-217ENST00000540166 SLC16A8O95907 504 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 HSD3B1P14060 373 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 CSF2RBP32927 897 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 PTGFRP43088 359 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 POU4F2Q12837 409 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 HFEQ30201 348 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 MANEAQ5SRI9 462 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 FAM27D1Q5T7N8 215 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 HES3Q5TGS1 186 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 RNLSQ5VYX0 342 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 ZDHHC20Q5W0Z9 365 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 NHLRC1Q6VVB1 395 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 CPOQ8IVL8 374 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 FAM71CQ8NEG0 241 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 OR13H1Q8NG92 308 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 TMEM121BQ9BXQ6 578 aaPredicted RBP8.02□□□□□ -1.13
DDB1-217ENST00000540166 HRASLSQ9HDD0 168 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 SMCO4Q9NRQ5 59 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 GFOD1Q9NXC2 390 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 CNIH4Q9P003 139 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 USP36Q9P275 1121 aaKnown RBP8.02□□□□□ -1.13
DDB1-217ENST00000540166 P2RX2Q9UBL9 471 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 HS3ST2Q9Y278 367 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 CHST2Q9Y4C5 530 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 SLC22A7Q9Y694 548 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 CCDC88CQ9P219 2028 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 APC2O95996 2303 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 PLSCR5A0PG75 271 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 OR6C68A6NDL8 312 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 TMEM8BA6NDV4 472 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 OR6C65A6NJZ3 312 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 SOCS5O75159 536 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 LIMS3P0CW19 117 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 LIMS4P0CW20 117 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 IDSP22304 550 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 UQCRC2P22695 453 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 PTAFRP25105 342 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 DLSTP36957 453 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 PTH2RP49190 550 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 PPT1P50897 306 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 FABP9Q0Z7S8 132 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 SEC23BQ15437 767 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 PLEKHS1Q5SXH7 462 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 ZNF322Q6U7Q0 402 aaPredicted RBP8.02□□□□□ -1.13
DDB1-217ENST00000540166 TMEM200AQ86VY9 491 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 GID4Q8IVV7 300 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 LMNTD1Q8N9Z9 388 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 OR1S1Q8NH92 325 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 BBS4Q96RK4 519 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 CMKLR1Q99788 373 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 RIOK2Q9BVS4 552 aaKnown RBP8.02□□□□□ -1.13
DDB1-217ENST00000540166 PAPOLGQ9BWT3 736 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms