RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 ELFN2Q5R3F8 820 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 FAM74A1Q5RGS3 127 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 BAIAP2L2Q6UXY1 529 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 HIST3H2AQ7L7L0 130 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 PRSS41Q7RTY9 318 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 COX18Q8N8Q8 333 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 HIST1H2ACQ93077 130 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 CHST6Q9GZX3 395 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 KCNK15Q9H427 330 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 SERGEFQ9UGK8 458 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 EML5Q05BV3 1969 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 A0A1B0GWA3 101 aa12.77□□□□□ -0.36
SCNN1A-215ENST00000540037 ECDO95905 644 aaPredicted RBP12.77□□□□□ -0.36
SCNN1A-215ENST00000540037 CBX7O95931 251 aa12.77□□□□□ -0.36
SCNN1A-215ENST00000540037 IFNA16P05015 189 aa12.77□□□□□ -0.36
SCNN1A-215ENST00000540037 ADRA2CP18825 462 aa12.77□□□□□ -0.36
SCNN1A-215ENST00000540037 AK4P27144 223 aaPredicted RBP12.77□□□□□ -0.36
SCNN1A-215ENST00000540037 EMDP50402 254 aa12.77□□□□□ -0.36
SCNN1A-215ENST00000540037 GUCA2AQ02747 115 aa12.77□□□□□ -0.36
SCNN1A-215ENST00000540037 RPL22L1Q6P5R6 122 aaKnown RBP12.77□□□□□ -0.36
SCNN1A-215ENST00000540037 BOLLQ8N9W6 283 aaKnown RBP12.77□□□□□ -0.36
SCNN1A-215ENST00000540037 OR8K3Q8NH51 312 aa12.77□□□□□ -0.36
SCNN1A-215ENST00000540037 SCARB1Q8WTV0 552 aa12.77□□□□□ -0.36
SCNN1A-215ENST00000540037 EMC3Q9P0I2 261 aa12.77□□□□□ -0.36
SCNN1A-215ENST00000540037 EDDM13A0A1B0GTR0 161 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 TUBAL3A6NHL2 446 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 ZNF879B4DU55 563 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 P2RX6O15547 441 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 NDUFB6O95139 128 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 TAS2R20P59543 309 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 ZNF660Q6AZW8 331 aaPredicted RBP12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 ZNF613Q6PF04 617 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 MAMSTRQ6ZN01 415 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 TMEM52Q8NDY8 209 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 OR4K14Q8NGD5 310 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 RNF166Q96A37 237 aaPredicted RBP12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 RASD2Q96D21 266 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 S100A16Q96FQ6 103 aaKnown RBP12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 HSPA12BQ96MM6 686 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 TSSK2Q96PF2 358 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 LDAHQ9H6V9 325 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 V9GY05 133 aa12.77□□□□□ -0.37
SCNN1A-215ENST00000540037 ARID1BQ8NFD5 2236 aaPredicted RBP12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 OR6C65A6NJZ3 312 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 FAM74A7A6NL05 159 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 B3GALNT1O75752 331 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 DBIP07108 87 aaKnown RBP12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 THBS1P07996 1170 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 OR2T7P0C7T2 308 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 ITPKBP27987 946 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 SRSF5Q13243 272 aaKnown RBP12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 NDUFAF6Q330K2 333 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 FAM74A3Q4VXF1 159 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 UNQ9370/PRO34162Q6UXP9 181 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 GSG1LQ6UXU4 331 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 MUC20Q8N307 709 aaPredicted RBP12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 OR2T27Q8NH04 317 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 SMARCD2Q92925 531 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 MRPS24Q96EL2 167 aaKnown RBP12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 IFT46Q9NQC8 304 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 ZNF275Q9NSD4 429 aaPredicted RBP12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 CHRNA9Q9UGM1 479 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 MAFFQ9ULX9 164 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 ICAM5Q9UMF0 924 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 RABL2BQ9UNT1 228 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 TICRRQ7Z2Z1 1910 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 TMEM272A0A1B0GTI8 110 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 OR6C68A6NDL8 312 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 KRBOX1C9JBD0 128 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 EML2O95834 649 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 CT62P0C5K7 136 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 ACRP10323 421 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 RPS4Y1P22090 263 aaKnown RBP12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 GABRA3P34903 492 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 AP3S2P59780 193 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 MAT1AQ00266 395 aaKnown RBP12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 TNFRSF17Q02223 184 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 IRF4Q15306 451 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 PCGF3Q3KNV8 242 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 OTPQ5XKR4 325 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 CNKSR3Q6P9H4 555 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 NUDT18Q6ZVK8 323 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 MFSD9Q8NBP5 474 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 DVL3Q92997 716 aaPredicted RBP12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 Q96M85 177 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 ACSL5Q9ULC5 683 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 MRPS2Q9Y399 296 aaKnown RBP12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 CHD9Q3L8U1 2897 aa12.76□□□□□ -0.37
SCNN1A-215ENST00000540037 MAS1P04201 325 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 DRD3P35462 400 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 RPS27P42677 84 aaKnown RBP12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 FNTBP49356 437 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 SORDQ00796 357 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 OLFML2AQ68BL7 652 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 RPL13AP3Q6NVV1 102 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 ZNF511Q8NB15 262 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 OR4C16Q8NGL9 310 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 PNPLA2Q96AD5 504 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 DPYSL5Q9BPU6 564 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 EVA1AQ9H8M9 152 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms