RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 GGT1P19440 569 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 TCN1P20061 433 aaPredicted RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 ZNF83P51522 516 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 MAP2K6P52564 334 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 SPCS3P61009 180 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 SELPLGQ14242 412 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 GANABQ14697 944 aaKnown RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 AKIRIN2Q53H80 203 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 C9orf152Q5JTZ5 239 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 DESI1Q6ICB0 168 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 FAM111BQ6SJ93 734 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 C16orf62Q7Z3J2 963 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 SPATA19Q7Z5L4 167 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 C10orf53Q8N6V4 93 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 CELF2-AS1Q8N7Q2 184 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 EIF1ADQ8N9N8 165 aaKnown RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 NFAM1Q8NET5 270 aaPredicted RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 PTPMT1Q8WUK0 201 aaPredicted RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 NAA11Q9BSU3 229 aaPredicted RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 DCDC2Q9UHG0 476 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 CELSR3Q9NYQ7 3312 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 A0A087X1B8 175 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 MBD3L3A6NE82 208 aaPredicted RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 ABCD4O14678 606 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 AKAP8O43823 692 aaKnown RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 RGS9O75916 674 aaPredicted RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 H6PDO95479 791 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 AIFM1O95831 613 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 ANXA4P09525 319 aaPredicted RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 ACVR1BP36896 505 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 CSNK2A1P68400 391 aaPredicted RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 PMS2P3Q13401 168 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 FAM189A2Q15884 450 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 CTU2Q2VPK5 515 aaKnown RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 PAN3Q58A45 887 aaKnown RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 EMC4Q5J8M3 183 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 ANKRD22Q5VYY1 191 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 CASP12Q6UXS9 341 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 OR5M1Q8NGP8 315 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 OR52N5Q8NH56 324 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 OR2V1Q8NHB1 315 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 MBD3L2Q8NHZ7 208 aaPredicted RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 PNPT1Q8TCS8 783 aaKnown RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 ZFP90Q8TF47 636 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 HSD17B8Q92506 261 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 UFD1Q92890 307 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 GMPPAQ96IJ6 420 aaPredicted RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 ANGPTL4Q9BY76 406 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 RACGAP1Q9H0H5 632 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 SLC17A6Q9P2U8 582 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 HIVEP1P15822 2718 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 MGAM2Q2M2H8 2515 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 AP3D1O14617 1153 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 PCDH7O60245 1069 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 TSC22D2O75157 780 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 MBP02144 154 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 JUNP05412 331 aaKnown RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 ENO1P06733 434 aaKnown RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 CDKN2DP55273 166 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 WDR4P57081 412 aaKnown RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 LSM11P83369 360 aaKnown RBP eCLIP6.83□□□□□ -1.32
GNE-205ENST00000539815 CRYZQ08257 329 aaKnown RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 HSPB3Q12988 150 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 CCNIQ14094 377 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 ZMAT1Q5H9K5 638 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 THEM4Q5T1C6 240 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 C1orf122Q6ZSJ8 110 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 CHERPQ8IWX8 916 aaKnown RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 APH1AQ96BI3 265 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 WDYHV1Q96HA8 205 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 APOPT1Q96IL0 206 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 TNFRSF13CQ96RJ3 184 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 NCOR1P1Q9H4R4 102 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 UFSP2Q9NUQ7 469 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 RAB26Q9ULW5 256 aa6.83□□□□□ -1.32
GNE-205ENST00000539815 CHTOPQ9Y3Y2 248 aaKnown RBP6.83□□□□□ -1.32
GNE-205ENST00000539815 COL12A1Q99715 3063 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 H3BMH7 237 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 J3QW42 95 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 SULT2B1O00204 365 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 PRKD3O94806 890 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 ERGP11308 486 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 SLC7A2P52569 658 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 C1DQ13901 141 aaKnown RBP6.82□□□□□ -1.32
GNE-205ENST00000539815 RNPS1Q15287 305 aaKnown RBP6.82□□□□□ -1.32
GNE-205ENST00000539815 FBXL19-AS1Q494R0 122 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 OGFRL1Q5TC84 451 aaPredicted RBP6.82□□□□□ -1.32
GNE-205ENST00000539815 CYHR1Q6ZMK1 362 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 TMPPEQ6ZT21 453 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 DDIASQ8IXT1 998 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 C1orf52Q8N6N3 182 aaKnown RBP6.82□□□□□ -1.32
GNE-205ENST00000539815 MYDGFQ969H8 173 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 TIMD4Q96H15 378 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 OR5B2Q96R09 309 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 NPAS2Q99743 824 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 SLC19A3Q9BZV2 496 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 MANSC1Q9H8J5 431 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 CAB39LQ9H9S4 337 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 NIT2Q9NQR4 276 aa6.82□□□□□ -1.32
GNE-205ENST00000539815 CMTM6Q9NX76 183 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms