RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 PDK3Q15120 406 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF74Q16587 644 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 SLC25A35Q3KQZ1 300 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 TMEM201Q5SNT2 666 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 LUZP2Q86TE4 346 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 OR6K3Q8NGY3 331 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF417Q8TAU3 575 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 HS6ST2Q96MM7 605 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 PSMG3-AS1Q96PY0 264 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF587Q96SQ5 575 aaPredicted RBP11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 SLC19A3Q9BZV2 496 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 OPN3Q9H1Y3 402 aaPredicted RBP11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 MMADHCQ9H3L0 296 aaPredicted RBP11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 PIGMQ9H3S5 423 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 MAGIXQ9H6Y5 334 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 C12orf49Q9H741 205 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 NMNAT1Q9HAN9 279 aaPredicted RBP11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 GP6Q9HCN6 339 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 IL1RAPQ9NPH3 570 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 JKAMPQ9P055 326 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 C6orf203Q9P0P8 240 aaPredicted RBP11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 TESMINQ9Y4I5 508 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 IGKV3D-15A0A087WSY6 115 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 AQP12BA6NM10 295 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF724A8MTY0 619 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 PRSS44E7EML9 344 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 C19orf84I3L1E1 186 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 MT-ND1P03886 318 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 H1F0P07305 194 aaKnown RBP11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 ERFP50548 548 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 ASCL1P50553 236 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 SLC16A1P53985 500 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 CHRNB3Q05901 458 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 TFF3Q07654 80 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 SLC17A1Q14916 467 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 TMEM225Q6GV28 225 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 TBPL2Q6SJ96 375 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 SLC46A3Q7Z3Q1 461 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 SPATA24Q86W54 205 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 AQP12AQ8IXF9 295 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 ADGRG5Q8IZF4 528 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 KDM8Q8N371 416 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF610Q8N9Z0 462 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 PIP5K1AQ99755 562 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 TACO1Q9BSH4 297 aaKnown RBP11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 ASPNQ9BXN1 380 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 CHST11Q9NPF2 352 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 PLSCR4Q9NRQ2 329 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 C20orf141Q9NUB4 165 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 PROCRQ9UNN8 238 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 MED31Q9Y3C7 131 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 RP1L1Q8IWN7 2480 aaPredicted RBP11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 PCNX1Q96RV3 2341 aa11.3□□□□□ -0.6
TSPAN9-207ENST00000539631 A0A087WUU8 490 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 MS4A18H0YCH9 400 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 OR7A10O76100 309 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 MT-ATP6P00846 226 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 CD8BP10966 210 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 EDNRAP25101 427 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 RRM2P31350 389 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 NTF4P34130 210 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 MAGEA2P43356 314 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 SPIBQ01892 262 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 PMS2P3Q13401 168 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 MFSD13AQ14CX5 517 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 MS4A18Q3C1V0 323 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 FAM98BQ52LJ0 330 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 FGD3Q5JSP0 725 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 PODNL1Q6PEZ8 512 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF730Q6ZMV8 503 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 H1FNTQ75WM6 255 aaPredicted RBP11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 MAMDC2Q7Z304 686 aaPredicted RBP11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 PIWIL3Q7Z3Z3 882 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 GPAT4Q86UL3 456 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 MEX3DQ86XN8 651 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 LRRC17Q8N6Y2 441 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 OR9K2Q8NGE7 335 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 OR52J3Q8NH60 311 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 CANT1Q8WVQ1 401 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 ACOT11Q8WXI4 607 aaPredicted RBP11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 UTP4Q969X6 686 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 SGTBQ96EQ0 304 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 DHRS1Q96LJ7 313 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF347Q96SE7 839 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 SF3B5Q9BWJ5 86 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 KLHL4Q9C0H6 718 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 ANKRD19PQ9H560 264 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 FKRPQ9H9S5 495 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 NANSQ9NR45 359 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 MRPL39Q9NYK5 338 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 EMC3Q9P0I2 261 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 AURKCQ9UQB9 309 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 RASD1Q9Y272 281 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 NOSIPQ9Y314 301 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 CORINQ9Y5Q5 1042 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 KLF2Q9Y5W3 355 aaPredicted RBP11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 FLVCR1Q9Y5Y0 555 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 HECTD1Q9ULT8 2610 aa11.29□□□□□ -0.6
TSPAN9-207ENST00000539631 MYO18BQ8IUG5 2567 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms