RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 IGHV4-31P0DP07 118 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 KITP10721 976 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 ZNF16P17020 682 aaPredicted RBP10.91□□□□□ -0.66
VAMP1-206ENST00000538970 SELENOPP49908 381 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 LGALS3BPQ08380 585 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 LARS2Q15031 903 aaKnown RBP10.91□□□□□ -0.66
VAMP1-206ENST00000538970 ZSWIM7Q19AV6 140 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 TBRG1Q3YBR2 411 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 C1orf140Q5VVS0 124 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 NXNQ6DKJ4 435 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 TMEM225Q6GV28 225 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 MSANTD1Q6ZTZ1 278 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 CREB3L2Q70SY1 520 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 LINGO2Q7L985 606 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 MAVSQ7Z434 540 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 SERPINA11Q86U17 422 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 EPHX4Q8IUS5 362 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 PROX1Q92786 737 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 VPS33AQ96AX1 596 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 SLC38A2Q96QD8 506 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 SPATA9Q9BWV2 254 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 SDR39U1Q9NRG7 319 aaPredicted RBP10.91□□□□□ -0.66
VAMP1-206ENST00000538970 TMEM45AQ9NWC5 275 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 ZIM2Q9NZV7 527 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 RAB21Q9UL25 225 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 ARPC4-TTLL3A0A0A6YYG9 625 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 A0A0G2JPF8 293 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 OR6C65A6NJZ3 312 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 VWC2LB2RUY7 222 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 HNRNPCL2B2RXH8 293 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 HNRNPCL3B7ZW38 293 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 FTCDNL1E5RQL4 147 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 ZNF587BE7ETH6 402 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 SLCO1B7G3V0H7 640 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 PHF1O43189 567 aaPredicted RBP10.9□□□□□ -0.66
VAMP1-206ENST00000538970 HNRNPCL1O60812 293 aaKnown RBP10.9□□□□□ -0.66
VAMP1-206ENST00000538970 KRT33AO76009 404 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 ANP32DO95626 131 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 HNRNPCL4P0DMR1 293 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 NCF2P19878 526 aaPredicted RBP10.9□□□□□ -0.66
VAMP1-206ENST00000538970 USF1P22415 310 aaPredicted RBP10.9□□□□□ -0.66
VAMP1-206ENST00000538970 SNRPD2P62316 118 aaKnown RBP10.9□□□□□ -0.66
VAMP1-206ENST00000538970 SLC9B1Q4ZJI4 515 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 PRAMEF8Q5VWM4 474 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 PRAMEF7Q5VXH5 474 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 NIPAL3Q6P499 406 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 CROCCP2Q86T23 111 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 OR9I1Q8NGQ6 314 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 MGARPQ8TDB4 240 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 FBXO17Q96EF6 278 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 SORCS2Q96PQ0 1159 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 KCNK17Q96T54 332 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 KATNB1Q9BVA0 655 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 PTDSS2Q9BVG9 487 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 NELFAQ9H3P2 528 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 RMND5AQ9H871 391 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 THUMPD1Q9NXG2 353 aaKnown RBP10.9□□□□□ -0.66
VAMP1-206ENST00000538970 RASD1Q9Y272 281 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 FKBP7Q9Y680 259 aa10.9□□□□□ -0.66
VAMP1-206ENST00000538970 HAX1O00165 279 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 FZD7O75084 574 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 UPK3AO75631 287 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 AHSA1O95433 338 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 NUDT7P0C024 238 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 PNMTP11086 282 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 PAX7P23759 505 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 UBE2NP61088 152 aaKnown RBP10.89□□□□□ -0.67
VAMP1-206ENST00000538970 C6orf10Q5SRN2 563 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 ATG16L1Q676U5 607 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 CYB5R2Q6BCY4 276 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 MFSD8Q8NHS3 518 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 MAGEE2Q8TD90 523 aaPredicted RBP10.89□□□□□ -0.67
VAMP1-206ENST00000538970 STK35Q8TDR2 534 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 BCL2L2Q92843 193 aaPredicted RBP10.89□□□□□ -0.67
VAMP1-206ENST00000538970 ITCHQ96J02 903 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 ZNF317Q96PQ6 595 aaPredicted RBP10.89□□□□□ -0.67
VAMP1-206ENST00000538970 OR52B2Q96RD2 323 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 LINC00470Q9BZP3 86 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 ARMC7Q9H6L4 198 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 CACYBPQ9HB71 228 aaKnown RBP10.89□□□□□ -0.67
VAMP1-206ENST00000538970 CA10Q9NS85 328 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 CRNNQ9UBG3 495 aaPredicted RBP10.89□□□□□ -0.67
VAMP1-206ENST00000538970 LPAR3Q9UBY5 353 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 ZNF232Q9UNY5 417 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 IFT52Q9Y366 437 aa10.89□□□□□ -0.67
VAMP1-206ENST00000538970 A0A096LPE4 126 aa10.88□□□□□ -0.67
VAMP1-206ENST00000538970 A0A1W2PPZ6 126 aa10.88□□□□□ -0.67
VAMP1-206ENST00000538970 TMEM247A6NEH6 219 aa10.88□□□□□ -0.67
VAMP1-206ENST00000538970 NDUFS8O00217 210 aa10.88□□□□□ -0.67
VAMP1-206ENST00000538970 NR5A2O00482 541 aa10.88□□□□□ -0.67
VAMP1-206ENST00000538970 PDE5AO76074 875 aa10.88□□□□□ -0.67
VAMP1-206ENST00000538970 IGLV1-44P01699 117 aa10.88□□□□□ -0.67
VAMP1-206ENST00000538970 CRYAAP02489 173 aa10.88□□□□□ -0.67
VAMP1-206ENST00000538970 CECR9P0C854 216 aa10.88□□□□□ -0.67
VAMP1-206ENST00000538970 BMP2P12643 396 aa10.88□□□□□ -0.67
VAMP1-206ENST00000538970 HOXB9P17482 250 aaPredicted RBP10.88□□□□□ -0.67
VAMP1-206ENST00000538970 SERPINF1P36955 418 aa10.88□□□□□ -0.67
VAMP1-206ENST00000538970 PDLIM4P50479 330 aa10.88□□□□□ -0.67
VAMP1-206ENST00000538970 POLR2JP52435 117 aaKnown RBP10.88□□□□□ -0.67
VAMP1-206ENST00000538970 SLC18A1P54219 525 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms