RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 SHQ1Q6PI26 577 aaKnown RBP12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 THSD4Q6ZMP0 1018 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 ANKFN1Q8N957 763 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 ZFAND2BQ8WV99 257 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 GCDHQ92947 438 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 ZMYND19Q96E35 227 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 APOPT1Q96IL0 206 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 SLC17A7Q9P2U7 560 aa12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 MARCOQ9UEW3 520 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 FBXO9Q9UK97 447 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-206ENST00000538456 IGHV2OR16-5A0A0B4J2B6 119 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 TMEM129A0AVI4 362 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 AGAP5A6NIR3 686 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 VSTM5A8MXK1 200 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 B4DSR2 109 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 HMGN4O00479 90 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 IGKV3-15P01624 115 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 CHRM4P08173 479 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 IGFBP1P08833 259 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 UQCRBP14927 111 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 PAX7P23759 505 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 MAP2K6P52564 334 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 EMX2Q04743 252 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 EPS8Q12929 822 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 MAD2L1Q13257 205 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 SNTB2Q13425 540 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 SYPL1Q16563 259 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 C3orf36Q3SXR2 165 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 MRPL2Q5T653 305 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 PRAMEF8Q5VWM4 474 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 PRAMEF7Q5VXH5 474 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 KRT80Q6KB66 452 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 UGT2A3Q6UWM9 527 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 CREB3L2Q70SY1 520 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 RNF130Q86XS8 419 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 CMIPQ8IY22 773 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 CADM2Q8N3J6 435 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 OR8J2Q8NGG1 315 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 NEURL3Q96EH8 262 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 ANKRD27Q96NW4 1050 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 SLC35A5Q9BS91 424 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 TAPBPLQ9BX59 468 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 SLC38A1Q9H2H9 487 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 HIF1ANQ9NWT6 349 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 PKD1L1Q8TDX9 2849 aa12.1□□□□□ -0.47
SMARCA4-206ENST00000538456 PRSS51A0A1B0GVH4 220 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 ZNF503-AS2A6NEH8 195 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 FAM157AC9JC47 383 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 FRS3O43559 492 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 GKN3PP0CG01 181 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 IL7RP16871 459 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 CAPZA2P47755 286 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 P2RY4P51582 365 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 ARF1P84077 181 aaKnown RBP12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 DAG1Q14118 895 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 PDCD2Q16342 344 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 CARM1Q86X55 608 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 EPHX4Q8IUS5 362 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 CLDND2Q8NHS1 167 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 SGMS2Q8NHU3 365 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 MAGEE2Q8TD90 523 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 ZNF418Q8TF45 676 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 TMEM186Q96B77 213 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 ZNF317Q96PQ6 595 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 DPY30Q9C005 99 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 PIF1Q9H611 641 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 CRLF2Q9HC73 371 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 MOV10Q9HCE1 1003 aaKnown RBP12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 RLIMQ9NVW2 624 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 ASIC5Q9NY37 505 aa12.09□□□□□ -0.47
SMARCA4-206ENST00000538456 FAAHO00519 579 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 SPAG7O75391 227 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 SEC14L2O76054 403 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 CBR1P16152 277 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 COMPP49747 757 aaPredicted RBP12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 SH3BGRP55822 239 aaPredicted RBP12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 CLDN17P56750 224 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 SCGB2A2Q13296 93 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 GNA13Q14344 377 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 ANXA8L1Q5VT79 327 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 WDR93Q6P2C0 686 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 DEF8Q6ZN54 512 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 KDM8Q8N371 416 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 FAM169BQ8N8A8 192 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 VPS37AQ8NEZ2 397 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 TRNT1Q96Q11 434 aaKnown RBP12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 LRRC37BQ96QE4 947 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 PPCSQ9HAB8 311 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 NOX3Q9HBY0 568 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 MKS1Q9NXB0 559 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 RAB21Q9UL25 225 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 GRIP1Q9Y3R0 1128 aa12.08□□□□□ -0.48
SMARCA4-206ENST00000538456 TLDC2A0PJX2 215 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 A8MVM7 634 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 WNT9BO14905 357 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 VAMP5O95183 116 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 DBIP07108 87 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 MSMBP08118 114 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 SAGP10523 405 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 NR2F1P10589 423 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms