RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 A0A1W2PQ09 198 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PPM1DO15297 605 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 H2AFB2P0C5Z0 115 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 BCKDHBP21953 392 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 TRHRP34981 398 aaPredicted RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 STT3AP46977 705 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 GABARAPL2P60520 117 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 CDK5R2Q13319 367 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 IKZF1Q13422 519 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 C5orf46Q6UWT4 87 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 B3GLCTQ6Y288 498 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 MEX3BQ6ZN04 569 aaKnown RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 SPNS2Q8IVW8 549 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.95□□□□□ -1.62
LRP6-203ENST00000538239 BHLHE23Q8NDY6 225 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ABHD4Q8TB40 342 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 NUDT8Q8WV74 236 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ASB17Q8WXJ9 295 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 RASD2Q96D21 266 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SYT4Q9H2B2 425 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 NT5DC2Q9H857 520 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ZNF355PQ9NSJ1 428 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SHROOM3Q8TF72 1996 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 NKX6-3A6NJ46 265 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 METTL15A6NJ78 407 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 K7EQS6 105 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 LRRTM2O43300 516 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 DENRO43583 198 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 CAPNS1P04632 268 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 CELA2BP08218 269 aaPredicted RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 OR8G3PP0DMU2 310 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 C7P10643 843 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 SLC1A3P43003 542 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 NPSR1Q6W5P4 371 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 FBXL6Q8N531 539 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 ACBD4Q8NC06 268 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 MORN4Q8NDC4 146 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 OR4K15Q8NH41 348 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 ZNF417Q8TAU3 575 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 ZNF431Q8TF32 576 aaPredicted RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 C3orf49Q96BT1 292 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 S100PBPQ96BU1 408 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 ARSGQ96EG1 525 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 NEURL3Q96EH8 262 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 SLC19A3Q9BZV2 496 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 CTSFQ9UBX1 484 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 TIMM8BQ9Y5J9 83 aaPredicted RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 SHANK3Q9BYB0 1731 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 MEGF11A6BM72 1044 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 GSTT2P0CG29 244 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 NME1P15531 152 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 MYF6P23409 242 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 LCN1P31025 176 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 KEAP1Q14145 624 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 FZD2Q14332 565 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 ALKBH6Q3KRA9 238 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 ACSM3Q53FZ2 586 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 EXOSC6Q5RKV6 272 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 TMEM215Q68D42 235 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 CENPSQ8N2Z9 138 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 CCDC71LQ8N9Z2 235 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 ZFP90Q8TF47 636 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 TRUB1Q8WWH5 349 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 ASB12Q8WXK4 309 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 RAB39BQ96DA2 213 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 LGALS12Q96DT0 336 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 EMC6Q9BV81 110 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 SEMA4CQ9C0C4 833 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 POMT2Q9UKY4 750 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 HHLA2Q9UM44 414 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 MCM3APO60318 1980 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 WNK3Q9BYP7 1800 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 TMEM72A0PK05 275 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 GFYI3L273 518 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 M0R036 132 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 CISD3P0C7P0 127 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 RAD52P43351 418 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 MTCP1P56278 107 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 NCS1P62166 190 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 Q6ZSR9 355 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 CYP4V2Q6ZWL3 525 aaPredicted RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 COX15Q7KZN9 410 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 PRSS48Q7RTY5 328 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 CMTM1Q8IZ96 169 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 RNF113BQ8IZP6 322 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 CHPT1Q8WUD6 406 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 CNOT9Q92600 299 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 BOD1Q96IK1 185 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 STACQ99469 402 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 PKMYT1Q99640 499 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 ALG12Q9BV10 488 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 FAM234AQ9H0X4 552 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 APMAPQ9HDC9 416 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 TRAPPC2LQ9UL33 140 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 YARS2Q9Y2Z4 477 aaKnown RBP4.94□□□□□ -1.62
LRP6-203ENST00000538239 COL4A1P02462 1669 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 A8MVM7 634 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 SHOXO15266 292 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 PRAMEF4O60810 478 aa4.94□□□□□ -1.62
LRP6-203ENST00000538239 CRHBPP24387 322 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms