RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 Q6ZTK2 550 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 AAED1Q7RTV5 226 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 C1orf52Q8N6N3 182 aaKnown RBP7.81□□□□□ -1.16
USP28-205ENST00000537706 CDRT4Q8N9R6 151 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 RFWD2Q8NHY2 731 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 LINC01006Q8NI28 216 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 C10orf82Q8WW14 230 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 FAM71F1Q96KD3 344 aaPredicted RBP7.81□□□□□ -1.16
USP28-205ENST00000537706 CPNE1Q99829 537 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 BRF2Q9HAW0 419 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 CRLF2Q9HC73 371 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 SLCO1B3Q9NPD5 702 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 EQTNQ9NQ60 294 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 DECR2Q9NUI1 292 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 CARD8Q9Y2G2 431 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 PCDHGB5Q9Y5G0 923 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 POMT1Q9Y6A1 747 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 USH1CQ9Y6N9 552 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 CAPN7Q9Y6W3 813 aa7.81□□□□□ -1.16
USP28-205ENST00000537706 IGHV1-69-2A0A0G2JMI3 117 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 H0YHG0 523 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 EIF1BO60739 113 aaKnown RBP7.8□□□□□ -1.16
USP28-205ENST00000537706 NKX2-2O95096 273 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 PSMG1O95456 288 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 IGKV3-15P01624 115 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 IGHMP01871 453 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 JUNP05412 331 aaKnown RBP7.8□□□□□ -1.16
USP28-205ENST00000537706 TROVE2P10155 538 aaKnown RBP eCLIP7.8□□□□□ -1.16
USP28-205ENST00000537706 PRPS2P11908 318 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 NR4A1P22736 598 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 CRHR1P34998 444 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 SH3BGRP55822 239 aaPredicted RBP7.8□□□□□ -1.16
USP28-205ENST00000537706 OR2B6P58173 313 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 GALNT1Q10472 559 aaPredicted RBP7.8□□□□□ -1.16
USP28-205ENST00000537706 NPRL3Q12980 569 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 QPRTQ15274 297 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 CD226Q15762 336 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 GALNTL6Q49A17 601 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 MROH9Q5TGP6 573 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 METTL2BQ6P1Q9 378 aaKnown RBP7.8□□□□□ -1.16
USP28-205ENST00000537706 OR4S1Q8NGB4 309 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 OR5W2Q8NH69 310 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 TBC1D15Q8TC07 691 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 SELENOMQ8WWX9 145 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 DYRK2Q92630 601 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 SLC6A13Q9NSD5 602 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 UBAP1Q9NZ09 502 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 LEF1Q9UJU2 399 aaPredicted RBP7.8□□□□□ -1.16
USP28-205ENST00000537706 HDGFL3Q9Y3E1 203 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 PSAT1Q9Y617 370 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 MYO1GB0I1T2 1018 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 BIRC5O15392 142 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 GLRA3O75311 464 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 DCTN3O75935 186 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 NCR1O76036 304 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 UBOX5O94941 541 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 WISP3O95389 354 aaPredicted RBP7.8□□□□□ -1.16
USP28-205ENST00000537706 IFI6P09912 130 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 FUT4P22083 530 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 ALDH3A1P30838 453 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 GPC1P35052 558 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 CRYBB2P43320 205 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 MAGEA12P43365 314 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 ALDH18A1P54886 795 aaKnown RBP7.8□□□□□ -1.16
USP28-205ENST00000537706 RELBQ01201 579 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 GALK2Q01415 458 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 MERTKQ12866 999 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 SF3A3Q12874 501 aaKnown RBP eCLIP7.8□□□□□ -1.16
USP28-205ENST00000537706 PFKFB4Q16877 469 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 TRMT5Q32P41 509 aaKnown RBP7.8□□□□□ -1.16
USP28-205ENST00000537706 TIGD2Q4W5G0 525 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 SPDYAQ5MJ70 313 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 GRTP1Q5TC63 336 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 RAPH1Q70E73 1250 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 ST8SIA1Q92185 356 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 BCL2L2Q92843 193 aaPredicted RBP7.8□□□□□ -1.16
USP28-205ENST00000537706 TMEM45BQ96B21 275 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 KTI12Q96EK9 354 aaPredicted RBP7.8□□□□□ -1.16
USP28-205ENST00000537706 AURKBQ96GD4 344 aaPredicted RBP7.8□□□□□ -1.16
USP28-205ENST00000537706 MARCH7Q9H992 704 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 CAB39LQ9H9S4 337 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 NOX3Q9HBY0 568 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 OR5V1Q9UGF6 321 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 SNX6Q9UNH7 406 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 INSIG2Q9Y5U4 225 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 FLVCR1Q9Y5Y0 555 aa7.8□□□□□ -1.16
USP28-205ENST00000537706 IGHV3OR16-10A0A075B7F0 116 aa7.79□□□□□ -1.16
USP28-205ENST00000537706 CCDC189A1A4V9 331 aa7.79□□□□□ -1.16
USP28-205ENST00000537706 WDR91A4D1P6 747 aa7.79□□□□□ -1.16
USP28-205ENST00000537706 CFAP73A6NFT4 308 aa7.79□□□□□ -1.16
USP28-205ENST00000537706 ANKRD28O15084 1053 aa7.79□□□□□ -1.16
USP28-205ENST00000537706 TRAF3IP2O43734 574 aaPredicted RBP7.79□□□□□ -1.16
USP28-205ENST00000537706 PCDH7O60245 1069 aa7.79□□□□□ -1.16
USP28-205ENST00000537706 EIF4E2O60573 245 aaKnown RBP7.79□□□□□ -1.16
USP28-205ENST00000537706 KCNK2O95069 426 aa7.79□□□□□ -1.16
USP28-205ENST00000537706 TGDSO95455 350 aa7.79□□□□□ -1.16
USP28-205ENST00000537706 LGI1O95970 557 aa7.79□□□□□ -1.16
USP28-205ENST00000537706 MT-ND5P03915 603 aa7.79□□□□□ -1.16
USP28-205ENST00000537706 PPIAL4GP0DN37 164 aa7.79□□□□□ -1.16
USP28-205ENST00000537706 NAT2P11245 290 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms