RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 CHAC2Q8WUX2 184 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 GHSRQ92847 366 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 KTI12Q96EK9 354 aaPredicted RBP14.26□□□□□ -0.13
MKS1-204ENST00000537529 PELI1Q96FA3 418 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 LPAR4Q99677 370 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 NCDNQ9UBB6 729 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 ATXN7L1Q9ULK2 861 aaPredicted RBP14.26□□□□□ -0.13
MKS1-204ENST00000537529 CPED1A4D0V7 1026 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 RFX2P48378 723 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 GDI2P50395 445 aaKnown RBP14.26□□□□□ -0.13
MKS1-204ENST00000537529 ACSM3Q53FZ2 586 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 SPATC1Q76KD6 591 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 SMIM19Q96E16 107 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 DEPDC7Q96QD5 511 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 TTYH2Q9BSA4 534 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 RTN4RQ9BZR6 473 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 PPP1R3EQ9H7J1 279 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 GNG8Q9UK08 70 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 MOKQ9UQ07 419 aa14.26□□□□□ -0.13
MKS1-204ENST00000537529 ADAMTS20P59510 1910 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 CCDC163A0A0D9SF12 145 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 A0A1W2PRG6 482 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 FAM25AB3EWG3 89 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 FAM25CB3EWG5 89 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 FAM25GB3EWG6 89 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 NUDT14O95848 222 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 CD1AP06126 327 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 HOXA6P31267 233 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 CDKN2AP42771 156 aaKnown RBP14.25□□□□□ -0.13
MKS1-204ENST00000537529 SIRPAP78324 504 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 DAB2P98082 770 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 LTBQ06643 244 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 RPL18Q07020 188 aaKnown RBP14.25□□□□□ -0.13
MKS1-204ENST00000537529 RIN1Q13671 783 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 CBFBQ13951 182 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 IL18Q14116 193 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 CCDC58Q4VC31 144 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 TRIQKQ629K1 86 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 GUSBP11Q6P575 273 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 RPL22L1Q6P5R6 122 aaKnown RBP14.25□□□□□ -0.13
MKS1-204ENST00000537529 TSSK4Q6SA08 328 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 KANSL1Q7Z3B3 1105 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 IL17RDQ8NFM7 739 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 STT3BQ8TCJ2 826 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 ZNRF4Q8WWF5 429 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 TAAR8Q969N4 342 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 ZNF524Q96C55 264 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 KLHDC3Q9BQ90 382 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 ALG12Q9BV10 488 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 PPIL3Q9H2H8 161 aaKnown RBP14.25□□□□□ -0.13
MKS1-204ENST00000537529 RPRD1BQ9NQG5 326 aaKnown RBP14.25□□□□□ -0.13
MKS1-204ENST00000537529 SLC22A11Q9NSA0 550 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 GRHPRQ9UBQ7 328 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 SUSD2Q9UGT4 822 aa14.25□□□□□ -0.13
MKS1-204ENST00000537529 IGLV3-12A0A075B6K2 115 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 TRAV36DV7A0A075B6V5 113 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 A0A1B0GTQ1 180 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 LINC00854A0A1B0GVQ3 168 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 KHNYNO15037 678 aaKnown RBP14.24□□□□□ -0.13
MKS1-204ENST00000537529 GMFGO60234 142 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 CPNE3O75131 537 aaKnown RBP14.24□□□□□ -0.13
MKS1-204ENST00000537529 SLC2A2P11168 524 aaPredicted RBP14.24□□□□□ -0.13
MKS1-204ENST00000537529 EDNRAP25101 427 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 APEX1P27695 318 aaKnown RBP14.24□□□□□ -0.13
MKS1-204ENST00000537529 EVI2BP34910 448 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 CASP3P42574 277 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 TPTEP56180 551 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 FAM27D1Q5T7N8 215 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 GPR139Q6DWJ6 353 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 SFXN4Q6P4A7 337 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 ZNF574Q6ZN55 896 aaPredicted RBP14.24□□□□□ -0.13
MKS1-204ENST00000537529 SHISA6Q6ZSJ9 500 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 TMPRSS9Q7Z410 1059 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 NR2C2APQ86WQ0 139 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 ZBTB8BQ8NAP8 495 aaPredicted RBP14.24□□□□□ -0.13
MKS1-204ENST00000537529 RXFP3Q9NSD7 469 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 SACM1LQ9NTJ5 587 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 NPAP1Q9NZP6 1156 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 MALT1Q9UDY8 824 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 COPS3Q9UNS2 423 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 COLQQ9Y215 455 aaPredicted RBP14.24□□□□□ -0.13
MKS1-204ENST00000537529 SCO2O43819 266 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 SLC25A12O75746 678 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 BGLAPP02818 100 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 RPS5P46782 204 aaKnown RBP14.24□□□□□ -0.13
MKS1-204ENST00000537529 OR2B6P58173 313 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 LINC01590Q5TEZ4 76 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 ZNF517Q6ZMY9 492 aaPredicted RBP14.24□□□□□ -0.13
MKS1-204ENST00000537529 MAMSTRQ6ZN01 415 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 SLC16A9Q7RTY1 509 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 RAB43Q86YS6 212 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 Q8N402 240 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 EXD3Q8N9H8 876 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 THAP4Q8WY91 577 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 TP53INP1Q96A56 240 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 EYSQ5T1H1 3165 aa14.24□□□□□ -0.13
MKS1-204ENST00000537529 TRAV1-2A0A0B4J238 106 aa14.23□□□□□ -0.13
MKS1-204ENST00000537529 OR6C70A6NIJ9 312 aa14.23□□□□□ -0.13
MKS1-204ENST00000537529 MAGEB4O15481 346 aaPredicted RBP14.23□□□□□ -0.13
MKS1-204ENST00000537529 GPRIN2O60269 458 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms