RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 SYNJ2BP-COX16A0A087WUM0 186 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 A0A087WZ39 114 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 RGSL1A5PLK6 1076 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 A8MX80 341 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 DEFB108AA8MXU0 73 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 SLCO1B7G3V0H7 640 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 GOLGA8SH3BPF8 625 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 BMPR1BO00238 502 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 PCDH7O60245 1069 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 NME2P1O60361 137 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 CDC40O60508 579 aaKnown RBP eCLIP3.36□□□□□ -1.875e-11■□□□□ 11.3
SNHG1-203ENST00000537024 OR6B1O95007 311 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 OR6A2O95222 327 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 ERVK-10P10266 1014 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 HNF1AP20823 631 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 CCKARP32238 428 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 ACVR1BP36896 505 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 SLC6A12P48065 614 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 RPL34P49207 117 aaKnown RBP3.36□□□□□ -1.87
SNHG1-203ENST00000537024 GEMP55040 296 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 HERV-K104P63124 156 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 RPL36AP83881 106 aaKnown RBP3.36□□□□□ -1.87
SNHG1-203ENST00000537024 SRSF9Q13242 221 aaKnown RBP eCLIP3.36□□□□□ -1.87
SNHG1-203ENST00000537024 OR1C1Q15619 314 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 FAM106AQ4KMX7 169 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 FASTKD1Q53R41 847 aaKnown RBP3.36□□□□□ -1.87
SNHG1-203ENST00000537024 TFDP3Q5H9I0 405 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 ZCCHC12Q6PEW1 402 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 LCLAT1Q6UWP7 414 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 ABRAXAS1Q6UWZ7 409 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 CCBE1Q6UXH8 406 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-203ENST00000537024 OOSP2Q86WS3 158 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 SLC43A2Q8N370 569 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 IPMKQ8NFU5 416 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 OR10G8Q8NGN5 311 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 ZNRF4Q8WWF5 429 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 ESAMQ96AP7 390 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 C8orf44Q96CB5 159 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 CXorf40BQ96DE9 158 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 OMA1Q96E52 524 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 HSFY1Q96LI6 401 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 UHRF2Q96PU4 802 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 CCM2Q9BSQ5 444 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 GANQ9H2C0 597 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 RWDD1Q9H446 243 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-203ENST00000537024 ATP13A3Q9H7F0 1226 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 ZNF665Q9H7R5 613 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 C3orf14Q9HBI5 128 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 NGBQ9NPG2 151 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 FANCFQ9NPI8 374 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 SLC52A3Q9NQ40 469 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 MAN2C1Q9NTJ4 1040 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 TXLNGQ9NUQ3 528 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 COX16Q9P0S2 106 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 ZNF319Q9P2F9 582 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 COPS7AQ9UBW8 275 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 CTSFQ9UBX1 484 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 MTRF1LQ9UGC7 380 aaKnown RBP3.36□□□□□ -1.87
SNHG1-203ENST00000537024 NXT1Q9UKK6 140 aaKnown RBP3.36□□□□□ -1.87
SNHG1-203ENST00000537024 AP1M2Q9Y6Q5 423 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 UBR4Q5T4S7 5183 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 KIAA1549Q9HCM3 1950 aa3.36□□□□□ -1.87
SNHG1-203ENST00000537024 IGHV4-4A0A075B6R2 117 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 IGHV1-45A0A0A0MS14 117 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 ATP6AP2A0A1C7CYW4 349 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 NKX6-3A6NJ46 265 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 VSTM2BA6NLU5 285 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 PMS2P5A8MQ11 134 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 PDZK1P1A8MUH7 402 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 KRTAP29-1A8MX34 341 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-203ENST00000537024 BLOC1S5-TXNDC5H3BN57 136 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 M0QYV0 167 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 PSMD11O00231 422 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 CHEK1O14757 476 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 OR2B3O76000 313 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 AP2A2O94973 939 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 CCDC166P0CW27 439 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 TPBGLP0DKB5 382 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 CT45A8P0DMV1 189 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 CT45A9P0DMV2 189 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 CYLC1P35663 651 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-203ENST00000537024 LINC01547P58512 204 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-203ENST00000537024 SLC26A5P58743 744 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 KRTAP10-11P60412 298 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 NME3Q13232 169 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 IHHQ14623 411 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 MESDQ14696 234 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 HEPACAMQ14CZ8 416 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 SLC5A12Q1EHB4 618 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 CT45A2Q5DJT8 189 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 C1orf220Q5T0J3 134 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 TEX35Q5T0J7 233 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 C1orf185Q5T7R7 199 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 SPINK14Q6IE38 97 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-203ENST00000537024 LRRC31Q6UY01 552 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 WASH2PQ6VEQ5 465 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 RFLNAQ6ZTI6 216 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 CDHR3Q6ZTQ4 885 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 STXBP4Q6ZWJ1 553 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms