RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 IKZF5Q9H5V7 419 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 TUBA4BQ9H853 241 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 FBXO10Q9UK96 956 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 FBXL4Q9UKA2 621 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 PADI3Q9ULW8 664 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 KPTNQ9Y664 436 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 FEZF1A0PJY2 475 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 RFPL4AA6NLU0 287 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 RFPL4AL1F8VTS6 287 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ADH1AP07327 375 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 F3P13726 295 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 NAAAQ02083 359 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 EBPQ15125 230 aaKnown RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 GXYLT1Q4G148 440 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ARHGAP40Q5TG30 622 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 P4HA3Q7Z4N8 544 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 FRMD1Q8N878 549 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 SDR9C7Q8NEX9 313 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 SCAMP4Q969E2 229 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 HS6ST2Q96MM7 605 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 MED20Q9H944 212 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ACER3Q9NUN7 267 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 B4GALT6Q9UBX8 382 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 EXO1Q9UQ84 846 aaKnown RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 Q9Y3F1 56 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 TIMM8BQ9Y5J9 83 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 HMGB3O15347 200 aaKnown RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 HSPA12AO43301 675 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 AGR2O95994 175 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ACP5P13686 325 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 OR2B8PP59922 312 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 RAB1AP62820 205 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ALG11Q2TAA5 492 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 PGGHGQ32M88 737 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ARHGAP11AQ6P4F7 1023 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 RNF141Q8WVD5 230 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 CLCC1Q96S66 551 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 PCBD2Q9H0N5 130 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 DUSP22Q9NRW4 184 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF736B4DX44 427 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 H7BY64 318 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 PPP1R2P9O14990 202 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ARAFP10398 606 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 NME1P15531 152 aaKnown RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 HOXB9P17482 250 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 CLCN7P51798 805 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 PLEKHS1Q5SXH7 462 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 HIST2H3PS2Q5TEC6 136 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 OTUD1Q5VV17 481 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 OR5M10Q6IEU7 315 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 TMPRSS11FQ6ZWK6 438 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 HIST2H3AQ71DI3 136 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 DPPA4Q7L190 304 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 SLC35F3Q8IY50 421 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 NUP43Q8NFH3 380 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 OR13C3Q8NGS6 347 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 CXorf58Q96LI9 332 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 PRAP1Q96NZ9 151 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 CNTNAP3Q9BZ76 1288 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 SLC5A7Q9GZV3 580 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 TESQ9UGI8 421 aaKnown RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ANKRD36A6QL64 1941 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 PARP14Q460N5 1801 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 POM121BA6NF01 834 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 C1QTNF3-AMACRE9PGA6 284 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ATP1B1P05026 303 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 SFTPCP11686 197 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 CCKBRP32239 447 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ENPP2Q13822 863 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 OR7E24Q6IFN5 339 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 MEPCEQ7L2J0 689 aaKnown RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 OR11H7Q8NGC8 314 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 NUS1Q96E22 293 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF107Q9UII5 783 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 MIA3Q5JRA6 1907 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 TMEM200CA6NKL6 621 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF593O00488 134 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 UBE2CO00762 179 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 GALR3O60755 368 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 GPR32O75388 356 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 GP1BAP07359 652 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 HSD11B1P28845 292 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 LTBQ06643 244 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF626Q68DY1 528 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 LAIR1Q6GTX8 287 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 LEG1Q6P5S2 330 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 AKR7LQ8NHP1 331 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 LCN9Q8WX39 176 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 HAS2Q92819 552 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF764Q96H86 408 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 RTP3Q9BQQ7 232 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 WIF1Q9Y5W5 379 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 TBC1D3BA6NDS4 549 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ACOD1A6NK06 481 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ITGA5P08648 1049 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ATXN1LP0C7T5 689 aaKnown RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 CLUP10909 449 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 HOXC8P31273 242 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 SPCS3P61009 180 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 UBE2KP61086 200 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms