RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 RPS2P15880 293 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 REEP5Q00765 189 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 ACTBL2Q562R1 376 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 MED25Q71SY5 747 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 SLC35D2Q76EJ3 337 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 B3GNT8Q7Z7M8 397 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 SLC6A18Q96N87 628 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 SLC46A1Q96NT5 459 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 LIN7BQ9HAP6 207 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 RPH3ALQ9UNE2 315 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 SULT1C2O00338 296 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 GPRIN2O60269 458 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 NOVP48745 357 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 VEGFCP49767 419 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 BIDP55957 195 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 H1FXQ92522 213 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 ZBP1Q9H171 429 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 HLA-AP01891 365 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 TPOP07202 933 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 LGALS4P56470 323 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 SSX2Q16385 188 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 ESPNLQ6ZVH7 1005 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 SMIM15Q7Z3B0 74 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 TMEM185AQ8NFB2 350 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 TMIGD2Q96BF3 282 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 CENPOQ9BU64 300 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 MCOLN1Q9GZU1 580 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 EPHX3Q9H6B9 360 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 THAP10Q9P2Z0 257 aaPredicted RBP16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 TMEM212A6NML5 194 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 SOCS6O14544 535 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 MMP12P39900 470 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 RACK1P63244 317 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 LSAMPQ13449 338 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF691Q5VV52 312 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 OR13C9Q8NGT0 318 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 SAV1Q9H4B6 383 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 EMCNQ9ULC0 261 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 RFPL3O75679 317 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 GIFP27352 417 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 EIF1P41567 113 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 SLC9A3R2Q15599 337 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 LRRC26Q2I0M4 334 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 FCRLAQ7L513 359 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 SGPP1Q9BX95 441 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 THBS3P49746 956 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 PEA15Q15121 130 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 ALG12Q9BV10 488 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 TRBV4-1A0A0J9YWV2 114 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF891A8MT65 544 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 GABRPO00591 440 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 F11P03951 625 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 GGHQ92820 318 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 TMEM59Q9BXS4 323 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 BIN3Q9NQY0 253 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 GIPRP48546 466 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 PIWIL3Q7Z3Z3 882 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF454Q8N9F8 522 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 OR4A16Q8NH70 328 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 MRPL38Q96DV4 380 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 FAM234AQ9H0X4 552 aa16.86■□□□□ 0.29
SFSWAP-203ENST00000535236 TUSC2O75896 110 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 HEXAP06865 529 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 CHRNB1P11230 501 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 PTAFRP25105 342 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF813Q6ZN06 617 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 TNFRSF13CQ96RJ3 184 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 MED17Q9NVC6 651 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 TMEM72A0PK05 275 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 NUDT7P0C024 238 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 C18orf63Q68DL7 685 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 DESI1Q6ICB0 168 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 KRBA1A5PL33 1030 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 PRAMEF4O60810 478 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 GSTP1P09211 210 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 CD27P26842 260 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 IL3RAP26951 378 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 B3GNT9Q6UX72 402 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 TMEM64Q6YI46 380 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 LRRC56Q8IYG6 542 aaPredicted RBP16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 FRMD1Q8N878 549 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 PAQR8Q8TEZ7 354 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 SLA2Q9H6Q3 261 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF225Q9UK10 706 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 A0A1W2PPH5 198 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 C17orf112F2Z3M2 114 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 MSTNO14793 375 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 CACNG3O60359 315 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 NXPH2O95156 264 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 OLFM2O95897 454 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 CYB561P49447 251 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 MBOAT2Q6ZWT7 520 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 LKAAEAR1Q8TD35 194 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 TFAP2CQ92754 450 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 QRSL1Q9H0R6 528 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 MED20Q9H944 212 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 HS3ST3A1Q9Y663 406 aa16.85■□□□□ 0.29
SFSWAP-203ENST00000535236 DLX5P56178 289 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF534Q76KX8 674 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 RBMXL3Q8N7X1 1067 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms