RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TGFBR1P36897 503 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 SUMO3P55854 103 aaPredicted RBP11.17□□□□□ -0.62
SCARB1-204ENST00000535005 TBRG1Q3YBR2 411 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 PRAMEF20Q5VT98 475 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 ZNF767PQ75MW2 155 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 ZNF550Q7Z398 422 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 GATSQ8NAP1 163 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 OR4D11Q8NGI4 311 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 SLC7A6Q92536 515 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 ARSGQ96EG1 525 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 ABHD17AQ96GS6 310 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 C5orf34Q96MH7 638 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 RHNO1Q9BSD3 238 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.17□□□□□ -0.623e-9■■□□□ 12.2
SCARB1-204ENST00000535005 GALNT9Q9HCQ5 603 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 ACOXLQ9NUZ1 547 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 ICAM5Q9UMF0 924 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 TRAV17A0A0B4J275 112 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 LOC100506127A0A0U1RQW1 187 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 IQCMA0A1B0GVH7 501 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 MEIOCA2RUB1 952 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 FAAHO00519 579 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 FMO6PO60774 539 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 PDGFAP04085 211 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 GABRB1P18505 474 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 MAP1BP46821 2468 aaKnown RBP11.16□□□□□ -0.62
SCARB1-204ENST00000535005 SLC6A8P48029 635 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 RNF144AP50876 292 aaPredicted RBP11.16□□□□□ -0.62
SCARB1-204ENST00000535005 ZNF136P52737 540 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 P2RX3P56373 397 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 VLDLRP98155 873 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 GALK2Q01415 458 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 ZNF117Q03924 483 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 IQCCQ4KMZ1 466 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 ZNF766Q5HY98 468 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 CBLN3Q6UW01 205 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 Q6ZS92 163 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 FADS6Q8N9I5 356 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 WDSUB1Q8N9V3 476 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 TMEM178AQ8NBL3 297 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 FAM173AQ9BQD7 235 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 WFDC6Q9BQY6 131 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 RPRD1BQ9NQG5 326 aaKnown RBP11.16□□□□□ -0.62
SCARB1-204ENST00000535005 DEPPQ9NTK1 212 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 PPP4R1LQ9P1A2 415 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 STUB1Q9UNE7 303 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 C2orf72A6NCS6 295 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 ARRDC5A6NEK1 342 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 KLRC4-KLRK1H3BQV0 150 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 HCRTR2O43614 444 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 IFNW1P05000 195 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 TNFRSF1BP20333 461 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 ELAVL4P26378 380 aaKnown RBP11.16□□□□□ -0.62
SCARB1-204ENST00000535005 TNFSF8P32971 234 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 ACAA2P42765 397 aaKnown RBP11.16□□□□□ -0.62
SCARB1-204ENST00000535005 OR1E2P47887 323 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 P2RX1P51575 399 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 RGS8P57771 180 aaPredicted RBP11.16□□□□□ -0.62
SCARB1-204ENST00000535005 FOXO1Q12778 655 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 NDUFAF6Q330K2 333 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 CCDC58Q4VC31 144 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 RNLSQ5VYX0 342 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 TMPRSS11AQ6ZMR5 421 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 TSEN54Q7Z6J9 526 aaKnown RBP11.16□□□□□ -0.62
SCARB1-204ENST00000535005 NRARPQ7Z6K4 114 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 RDH10Q8IZV5 341 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 OR8H2Q8N162 312 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 GDPD1Q8N9F7 314 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 OR2M7Q8NG81 312 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 OR2M3Q8NG83 312 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 OR6T1Q8NGN1 323 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 OR5W2Q8NH69 310 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 ZFAND1Q8TCF1 268 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 Q96MT0 163 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 CHCHD6Q9BRQ6 235 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 CENPOQ9BU64 300 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 TAPBPLQ9BX59 468 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 OR51E2Q9H255 320 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 SEC14L4Q9UDX3 406 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 TESQ9UGI8 421 aaKnown RBP11.16□□□□□ -0.62
SCARB1-204ENST00000535005 CSAG2Q9Y5P2 127 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 ENPP4Q9Y6X5 453 aa11.16□□□□□ -0.62
SCARB1-204ENST00000535005 A0A0G2JMM0 328 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 A0A1W2PPB8 328 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 A0A1W2PRS3 328 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 CCDC182A6NF36 153 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 ANKUB1A6NFN9 424 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 KIR3DP1A8MWS1 328 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 B4DXG7 233 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 K7EM74 188 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 hCG_2039718K7EN88 272 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 M0R3H8 397 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 FRS3O43559 492 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 TPST2O60704 377 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 ADAM11O75078 769 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 PRG2P13727 222 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 C21orf33P30042 268 aaPredicted RBP11.15□□□□□ -0.62
SCARB1-204ENST00000535005 GRK5P34947 590 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 RFX2P48378 723 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 DNASE1L1P49184 302 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms