RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 RLIMQ9NVW2 624 aa12.06□□□□□ -0.48
CCDC84-208ENST00000534656 ADPRHL2Q9NX46 363 aa12.06□□□□□ -0.48
CCDC84-208ENST00000534656 ARFGEF3Q5TH69 2177 aa12.06□□□□□ -0.48
CCDC84-208ENST00000534656 MALRD1Q5VYJ5 2156 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 LRP5LA4QPB2 252 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 CDHR4A6H8M9 788 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 FRS3O43559 492 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 UPK3AO75631 287 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 SNUPNO95149 360 aaKnown RBP12.05□□□□□ -0.48
CCDC84-208ENST00000534656 IGLV1-44P01699 117 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 TACSTD2P09758 323 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 TFPTP0C1Z6 253 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 GKN3PP0CG01 181 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 CALCRP30988 508 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 CDKN2CP42773 168 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 TUBA1BP68363 451 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 TUBA4AP68366 448 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 MAPK11Q15759 364 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 ZSWIM7Q19AV6 140 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 COX20Q5RI15 118 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 WBP2NLQ6ICG8 309 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 NIPAL3Q6P499 406 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 ZNF621Q6ZSS3 439 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 TUBA1AQ71U36 451 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 VRK2Q86Y07 508 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 EPHX4Q8IUS5 362 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 CADM2Q8N3J6 435 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 RFLNBQ8N5W9 214 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 FAM169BQ8N8A8 192 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 NUP37Q8NFH4 326 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 ALKBH3Q96Q83 286 aaPredicted RBP12.05□□□□□ -0.48
CCDC84-208ENST00000534656 SORT1Q99523 831 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 NUF2Q9BZD4 464 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 LINC00470Q9BZP3 86 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 NELFAQ9H3P2 528 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 RASD1Q9Y272 281 aa12.05□□□□□ -0.48
CCDC84-208ENST00000534656 A0A096LPE4 126 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 A0A1W2PPZ6 126 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 VSTM5A8MXK1 200 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 BIRC5O15392 142 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 LILRA1O75019 489 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 IGKV3-15P01624 115 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 GSNP06396 782 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 DAOP14920 347 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 IL12AP29459 219 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 SLC1A6P48664 564 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 CHN2P52757 468 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 SH3BGRP55822 239 aaPredicted RBP12.04□□□□□ -0.48
CCDC84-208ENST00000534656 NME5P56597 212 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 COPZ1P61923 177 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 UFM1P61960 85 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 HGFACQ04756 655 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 LRRC74AQ0VAA2 488 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 LIN52Q52LA3 116 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 C1orf140Q5VVS0 124 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 PRAMEF8Q5VWM4 474 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 PRAMEF7Q5VXH5 474 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 OGFOD2Q6N063 350 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 ZNF836Q6ZNA1 936 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 KIRREL3Q8IZU9 778 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 OR52P1PQ8NH57 321 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 PNPT1Q8TCS8 783 aaKnown RBP12.04□□□□□ -0.48
CCDC84-208ENST00000534656 NEU4Q8WWR8 484 aaPredicted RBP12.04□□□□□ -0.48
CCDC84-208ENST00000534656 HPS1Q92902 700 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 OR52E6Q96RD3 313 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 DOK1Q99704 481 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 ZNF442Q9H7R0 627 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 SEC61A2Q9H9S3 476 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 MEAF6Q9HAF1 191 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 HAO1Q9UJM8 370 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 DSPPQ9NZW4 1301 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 NBEAL1Q6ZS30 2694 aa12.04□□□□□ -0.48
CCDC84-208ENST00000534656 A0A096LPI6 279 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 TMEM129A0AVI4 362 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 RPL36A-HNRNPH2H7BZ11 118 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 hCG_2039718K7EN88 272 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 TCF21O43680 179 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 NPIPB7O75200 414 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 KRT75O95678 551 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 ERCC1P07992 297 aaPredicted RBP12.03□□□□□ -0.48
CCDC84-208ENST00000534656 ALDOCP09972 364 aaKnown RBP12.03□□□□□ -0.48
CCDC84-208ENST00000534656 CBR1P16152 277 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 NPR2P20594 1047 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 IL2RGP31785 369 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 THBS4P35443 961 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 ROR2Q01974 943 aaKnown RBP12.03□□□□□ -0.48
CCDC84-208ENST00000534656 ZCCHC24Q8N2G6 241 aaKnown RBP12.03□□□□□ -0.48
CCDC84-208ENST00000534656 ZNF786Q8N393 782 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 LINC01356Q8N9X3 169 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 ANKK1Q8NFD2 765 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 STK35Q8TDR2 534 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 C1orf159Q96HA4 380 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 ANKRD27Q96NW4 1050 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 AIG1Q9NVV5 245 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 CALML5Q9NZT1 146 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 P2RX2Q9UBL9 471 aa12.03□□□□□ -0.48
CCDC84-208ENST00000534656 TMEFF2Q9UIK5 374 aaPredicted RBP12.03□□□□□ -0.48
CCDC84-208ENST00000534656 TMEM229AB2RXF0 380 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 FTCDNL1E5RQL4 147 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 ZNF432O94892 652 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms