RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 SLC17A4Q9Y2C5 497 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 WIF1Q9Y5W5 379 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 ETV7Q9Y603 341 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 ZNF407Q9C0G0 2248 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 A0A1W2PR80 420 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 C5orf63A6NC05 138 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 OR5K4A6NMS3 321 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 ZNF195O14628 629 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 P2RX6O15547 441 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 ZNF749O43361 778 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 HCN1O60741 890 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 ASS1P00966 412 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 SERPINA7P05543 415 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 ETS1P14921 441 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 FERP16591 822 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 CCNA2P20248 432 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 AADACP22760 399 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 SLC1A3P43003 542 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 EVCP57679 992 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 ADIGQ0VDE8 80 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 IFT88Q13099 833 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 GAMTQ14353 236 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 EFTUD2Q15029 972 aaKnown RBP eCLIP3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 GOLGA7BQ2TAP0 167 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 FGD3Q5JSP0 725 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 WDR88Q6ZMY6 472 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 SHISA6Q6ZSJ9 500 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 TMEM26Q6ZUK4 368 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 CYP4V2Q6ZWL3 525 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 CBWD2Q8IUF1 395 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 BATF2Q8N1L9 274 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 OR2AP1Q8NGE2 309 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 C10orf105Q8TEF2 133 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 SMAP2Q8WU79 429 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 TMEM190Q8WZ59 177 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 SMPDL3AQ92484 453 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 ISG20Q96AZ6 181 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 TBC1D31Q96DN5 1066 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 MRPL53Q96EL3 112 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 ZNF486Q96H40 463 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 WFIKKN1Q96NZ8 548 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 FAM111AQ96PZ2 611 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 ACCSQ96QU6 501 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 EPYCQ99645 322 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 SSX3Q99909 188 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 TM6SF2Q9BZW4 377 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 FNDC4Q9H6D8 234 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 ZNF665Q9H7R5 613 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 FANCEQ9HB96 536 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 GPN1Q9HCN4 374 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 ZNF629Q9UEG4 869 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 ERVK-19Q9WJR5 959 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 ANGPTL3Q9Y5C1 460 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 MMP24Q9Y5R2 645 aa3.7□□□□□ -1.82
ECHDC1-223ENST00000534442 A0A087WW49 117 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 CFAP73A6NFT4 308 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 BCKDKO14874 412 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 HSF2BPO75031 334 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 GMNNO75496 209 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 ADCY5O95622 1261 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 RHOCP08134 193 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 HBQ1P09105 142 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 ANPEPP15144 967 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 GNB3P16520 340 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 ACKR3P25106 362 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 CTNNA2P26232 953 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 MMP12P39900 470 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 PITPNBP48739 271 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 ZNF136P52737 540 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 CDH4P55283 916 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 DAOAP59103 153 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 KRTAP10-11P60412 298 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 SNRPD1P62314 119 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 UBE2IP63279 158 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 DCDP81605 110 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 RAD51Q06609 339 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 INCA1Q0VD86 236 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 PPP1R8Q12972 351 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 TAB1Q15750 504 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 FAM106AQ4KMX7 169 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 PYCR3Q53H96 274 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 DNAJC21Q5F1R6 531 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 SPANXN4Q5MJ08 99 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 ARHGAP17Q68EM7 881 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 FBXL22Q6P050 247 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 TMEM64Q6YI46 380 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 SETD3Q86TU7 594 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 NT5DC3Q86UY8 548 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 GPBP1Q86WP2 473 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 DND1Q8IYX4 353 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 SLC43A2Q8N370 569 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 CCDC185Q8N715 623 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 ATP6V0D2Q8N8Y2 350 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 SYT14Q8NB59 555 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 OR13C5Q8NGS8 318 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 GPR148Q8TDV2 347 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 DQX1Q8TE96 717 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 ESAMQ96AP7 390 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 TMIGD2Q96BF3 282 aa3.69□□□□□ -1.82
ECHDC1-223ENST00000534442 C8orf44Q96CB5 159 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms