RNA–Protein interactions for RNA: ENST00000533991.1

RDX-216, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-216ENST00000533991 SNX3O60493 162 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 ZNF432O94892 652 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 NPPAP01160 153 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 C8BP07358 591 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 HLA-DOBP13765 273 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 PPP3CBP16298 524 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 SELENOPP49908 381 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 SLC25A3Q00325 362 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 GABRA6Q16445 453 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 ALKBH2Q6NS38 261 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 ULK3Q6PHR2 472 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 SPATA21Q7Z572 469 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 RP9Q8TA86 221 aaKnown RBP13.54□□□□□ -0.24
RDX-216ENST00000533991 DNAJA4Q8WW22 397 aaPredicted RBP13.54□□□□□ -0.24
RDX-216ENST00000533991 NINJ1Q92982 152 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 KISS1RQ969F8 398 aaPredicted RBP13.54□□□□□ -0.24
RDX-216ENST00000533991 TMEM45BQ96B21 275 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 APH1AQ96BI3 265 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 MBD6Q96DN6 1003 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 ZHX1-C8orf76Q96EF9 292 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 MUS81Q96NY9 551 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 FOXC2Q99958 501 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 SF3B5Q9BWJ5 86 aaKnown RBP13.54□□□□□ -0.24
RDX-216ENST00000533991 MALT1Q9UDY8 824 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 TESQ9UGI8 421 aaKnown RBP13.54□□□□□ -0.24
RDX-216ENST00000533991 CSPG4Q6UVK1 2322 aa13.54□□□□□ -0.24
RDX-216ENST00000533991 A0A1W2PR80 420 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 ELOA3DA6NLF2 546 aaPredicted RBP13.53□□□□□ -0.24
RDX-216ENST00000533991 M0R082 166 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 NME4O00746 187 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 GPR171O14626 319 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 AIM2O14862 343 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 SHOX2O60902 331 aaPredicted RBP13.53□□□□□ -0.24
RDX-216ENST00000533991 MRPL33O75394 65 aaKnown RBP13.53□□□□□ -0.24
RDX-216ENST00000533991 CNOT4O95628 575 aaKnown RBP13.53□□□□□ -0.24
RDX-216ENST00000533991 GRPRP30550 384 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 FAPQ12884 760 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 ELOA3BQ3SY89 546 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 MMEL1Q495T6 779 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 BEX5Q5H9J7 111 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 ENTPD8Q5MY95 495 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 NCMAPQ5T1S8 102 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 C9orf135Q5VTT2 229 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 FAM91A1Q658Y4 838 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 CASP12Q6UXS9 341 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 PATL1Q86TB9 770 aaKnown RBP13.53□□□□□ -0.24
RDX-216ENST00000533991 ELOA3Q8NG57 546 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 VANGL1Q8TAA9 524 aaPredicted RBP13.53□□□□□ -0.24
RDX-216ENST00000533991 ZNF417Q8TAU3 575 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 ZNF837Q96EG3 531 aaPredicted RBP13.53□□□□□ -0.24
RDX-216ENST00000533991 SLC41A3Q96GZ6 507 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 ZNF587Q96SQ5 575 aaPredicted RBP13.53□□□□□ -0.24
RDX-216ENST00000533991 ECSITQ9BQ95 431 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 AMBRA1Q9C0C7 1298 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 PCDHAC1Q9H158 963 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 TMEM27Q9HBJ8 222 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 EMC3Q9P0I2 261 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 SLC25A15Q9Y619 301 aa13.53□□□□□ -0.24
RDX-216ENST00000533991 TRAV36DV7A0A075B6V5 113 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 CPSF4LA6NMK7 179 aaKnown RBP13.52□□□□□ -0.25
RDX-216ENST00000533991 FMO6PO60774 539 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 UPK3AO75631 287 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 AHSA1O95433 338 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 RAF1P04049 648 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 IL32P24001 234 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 LSM11P83369 360 aaKnown RBP eCLIP13.52□□□□□ -0.25
RDX-216ENST00000533991 VEZF1Q14119 521 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 ACKR1Q16570 336 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 DEFB113Q30KQ7 82 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 PHYHD1Q5SRE7 291 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 FBXW10Q5XX13 1052 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 AAED1Q7RTV5 226 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 TSEN54Q7Z6J9 526 aaKnown RBP13.52□□□□□ -0.25
RDX-216ENST00000533991 PIGWQ7Z7B1 504 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 GPAT4Q86UL3 456 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 BHLHE22Q8NFJ8 381 aaPredicted RBP13.52□□□□□ -0.25
RDX-216ENST00000533991 HSD17B8Q92506 261 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 SLC47A1Q96FL8 570 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 TXNDC15Q96J42 360 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 ZNF426Q9BUY5 554 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 FAM107BQ9H098 131 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 RPS6KB2Q9UBS0 482 aa13.52□□□□□ -0.25
RDX-216ENST00000533991 GMNCA6NCL1 334 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 OR5H1A6NKK0 313 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 FAM220BPB1ANY3 271 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 TRAF3IP2O43734 574 aaPredicted RBP13.51□□□□□ -0.25
RDX-216ENST00000533991 RAD51DO75771 328 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 DNASE1P24855 282 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 KDELR2P33947 212 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 OR1E2P47887 323 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 MAPRE2Q15555 327 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 TIMM23BQ5SRD1 257 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 TMEM225Q6GV28 225 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 ZNF613Q6PF04 617 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 ZNF704Q6ZNC4 412 aaPredicted RBP13.51□□□□□ -0.25
RDX-216ENST00000533991 CARM1Q86X55 608 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 NKAIN4Q8IVV8 208 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 MICU2Q8IYU8 434 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 UBE2J2Q8N2K1 259 aa13.51□□□□□ -0.25
RDX-216ENST00000533991 LRRC17Q8N6Y2 441 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms