RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 PDK3Q15120 406 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 C9orf135Q5VTT2 229 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 BEND4Q6ZU67 534 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 CBLL1Q75N03 491 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 TSEN54Q7Z6J9 526 aaKnown RBP11.85□□□□□ -0.51
CMTM1-219ENST00000533953 STK32CQ86UX6 486 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 MEX3DQ86XN8 651 aaKnown RBP11.85□□□□□ -0.51
CMTM1-219ENST00000533953 EPHX4Q8IUS5 362 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 PGAM4Q8N0Y7 254 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 LRRC17Q8N6Y2 441 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 OR9K2Q8NGE7 335 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 FAM222BQ8WU58 562 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 RASSF5Q8WWW0 418 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 C14orf79Q96F83 325 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 HSH2DQ96JZ2 352 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 EVA1AQ9H8M9 152 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 C6orf203Q9P0P8 240 aaPredicted RBP11.85□□□□□ -0.51
CMTM1-219ENST00000533953 CD300AQ9UGN4 299 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 V9GYQ6 96 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 SIAH2O43255 324 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 CHP2O43745 196 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 MRPL33O75394 65 aaKnown RBP11.84□□□□□ -0.51
CMTM1-219ENST00000533953 CTAG2O75638 210 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 LYZL6O75951 148 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 CH25HO95992 272 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 THBDP07204 575 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 HLA-DOBP13765 273 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 SSTR2P30874 369 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 FAM69AQ5T7M9 428 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 CASP12Q6UXS9 341 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 CREB3L2Q70SY1 520 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 FKBP9P1Q75LS8 142 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 TMEM200AQ86VY9 491 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 WDFY1Q8IWB7 410 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 UBE2J2Q8N2K1 259 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 PFN4Q8NHR9 129 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 TMEM255BQ8WV15 326 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 MED18Q9BUE0 208 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 LIME1Q9H400 295 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 MCCC2Q9HCC0 563 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 MEPEQ9NQ76 525 aaPredicted RBP11.84□□□□□ -0.51
CMTM1-219ENST00000533953 EMC3Q9P0I2 261 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 A4GNTQ9UNA3 340 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 TESMINQ9Y4I5 508 aa11.84□□□□□ -0.51
CMTM1-219ENST00000533953 MPDZO75970 2070 aa11.83□□□□□ -0.51
CMTM1-219ENST00000533953 A6NNC1 897 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 MS4A18H0YCH9 400 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 GPR171O14626 319 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 FFAR1O14842 300 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 PIP5K1CO60331 668 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 IGHV1-2P23083 117 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 GTF2E2P29084 291 aaKnown RBP11.83□□□□□ -0.52
CMTM1-219ENST00000533953 SELENOPP49908 381 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 UGT2B15P54855 530 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 IL1RL1Q01638 556 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 FAPQ12884 760 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 MS4A18Q3C1V0 323 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 IFI44LQ53G44 452 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 SFRP5Q5T4F7 317 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 SWT1Q5T5J6 900 aaKnown RBP11.83□□□□□ -0.52
CMTM1-219ENST00000533953 TSPO2Q5TGU0 170 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 TTC33Q6PID6 262 aaPredicted RBP11.83□□□□□ -0.52
CMTM1-219ENST00000533953 C16orf89Q6UX73 402 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 H1FNTQ75WM6 255 aaPredicted RBP11.83□□□□□ -0.52
CMTM1-219ENST00000533953 AAED1Q7RTV5 226 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 WFDC8Q8IUA0 241 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 APH1AQ96BI3 265 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 S100PBPQ96BU1 408 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 TXNDC15Q96J42 360 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 LURAP1Q96LR2 239 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 DACH2Q96NX9 599 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 TACO1Q9BSH4 297 aaKnown RBP11.83□□□□□ -0.52
CMTM1-219ENST00000533953 TMEM43Q9BTV4 400 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 ACTR6Q9GZN1 396 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 SLC7A10Q9NS82 523 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 B3GAT1Q9P2W7 334 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 NDRG3Q9UGV2 375 aa11.83□□□□□ -0.52
CMTM1-219ENST00000533953 POLQO75417 2590 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 ANKHD1Q8IWZ3 2542 aaKnown RBP11.82□□□□□ -0.52
CMTM1-219ENST00000533953 A0A1W2PPR1 153 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 A0A1W2PR80 420 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 CASKO14936 926 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 OR2T1O43869 369 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 SERPINI2O75830 405 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 PDE5AO76074 875 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 UBOX5O94941 541 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 DIRAS1O95057 198 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 OR5F1O95221 314 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 HSD17B1P14061 328 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 NQO1P15559 274 aaKnown RBP11.82□□□□□ -0.52
CMTM1-219ENST00000533953 FUT1P19526 365 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 CLDN17P56750 224 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 PMS2P3Q13401 168 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 DAZAP2Q15038 168 aaPredicted RBP11.82□□□□□ -0.52
CMTM1-219ENST00000533953 SAMD4BQ5PRF9 694 aaKnown RBP11.82□□□□□ -0.52
CMTM1-219ENST00000533953 FBXW9Q5XUX1 488 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 NIPAL3Q6P499 406 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 Q6ZT83 130 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 TRPM8Q7Z2W7 1104 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 LZICQ8WZA0 190 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms