RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 COPS3Q9UNS2 423 aa3.93□□□□□ -1.78
C11orf54-213ENST00000533585 VDAC3Q9Y277 283 aa3.93□□□□□ -1.78
C11orf54-213ENST00000533585 MRPS28Q9Y2Q9 187 aaKnown RBP3.93□□□□□ -1.78
C11orf54-213ENST00000533585 KCNIP3Q9Y2W7 256 aa3.93□□□□□ -1.78
C11orf54-213ENST00000533585 PRG3Q9Y2Y8 225 aaPredicted RBP3.93□□□□□ -1.78
C11orf54-213ENST00000533585 IGLV9-49A0A0B4J1Y8 123 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 RPS10-NUDT3A0A1W2PQS6 291 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 TRDCB7Z8K6 153 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 PLPP1O14494 284 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 HSD17B6O14756 317 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 RGS14O43566 566 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 CXCL13O43927 109 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 CTSVO60911 334 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 ADAP1O75689 374 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 UGT2B17O75795 530 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 TNFAIP8O95379 198 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 PLEKHA8P1O95397 391 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 DEXIO95424 95 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 FGGP02679 453 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 RHOCP08134 193 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 SLC35E2BP0CK96 405 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 MSNP26038 577 aaKnown RBP3.92□□□□□ -1.78
C11orf54-213ENST00000533585 HOXD3P31249 432 aaPredicted RBP3.92□□□□□ -1.78
C11orf54-213ENST00000533585 ARR3P36575 388 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 NBL1P41271 181 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 CSNK1A1P48729 337 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 SELENOPP49908 381 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 KPNA2P52292 529 aaKnown RBP3.92□□□□□ -1.78
C11orf54-213ENST00000533585 MRPS25P82663 173 aaKnown RBP3.92□□□□□ -1.78
C11orf54-213ENST00000533585 DGCR2P98153 550 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 REEP5Q00765 189 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 INSM1Q01101 510 aaPredicted RBP3.92□□□□□ -1.78
C11orf54-213ENST00000533585 GLO1Q04760 184 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 ARL16Q0P5N6 197 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 GNMTQ14749 295 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 EMC2Q15006 297 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 FAM189A2Q15884 450 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 UNC50Q53HI1 259 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 LEKR1Q6ZMV7 388 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.92□□□□□ -1.78
C11orf54-213ENST00000533585 SSX6Q7RTT6 188 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 IFNEQ86WN2 208 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 KIRREL3Q8IZU9 778 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 LIX1Q8N485 282 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 SMRP1Q8NCR6 262 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 OR4D10Q8NGI6 311 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 OR6F1Q8NGZ6 308 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 OR1L3Q8NH93 324 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 ACER1Q8TDN7 264 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 APOBEC4Q8WW27 367 aaKnown RBP3.92□□□□□ -1.78
C11orf54-213ENST00000533585 SCMH1Q96GD3 660 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 CENPNQ96H22 339 aaPredicted RBP3.92□□□□□ -1.78
C11orf54-213ENST00000533585 TNFRSF13CQ96RJ3 184 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 PSD2Q9BQI7 771 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 REEP4Q9H6H4 257 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 PLEKHA3Q9HB20 300 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 PATZ1Q9HBE1 687 aaKnown RBP3.92□□□□□ -1.78
C11orf54-213ENST00000533585 ZBTB20Q9HC78 741 aaPredicted RBP3.92□□□□□ -1.78
C11orf54-213ENST00000533585 TAS2R16Q9NYV7 291 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 CD274Q9NZQ7 290 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 WARS2Q9UGM6 360 aaKnown RBP3.92□□□□□ -1.78
C11orf54-213ENST00000533585 C3orf18Q9UK00 162 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 RALYQ9UKM9 306 aaKnown RBP3.92□□□□□ -1.78
C11orf54-213ENST00000533585 TCF19Q9Y242 345 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 PTGDR2Q9Y5Y4 395 aa3.92□□□□□ -1.78
C11orf54-213ENST00000533585 A0A1B0GVT2 93 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 GLTPD2A6NH11 291 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 IDSB3KWA1 339 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 C11orf98E9PRG8 122 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 K7ESM1 405 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 M0QXV9 152 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 DYNC1I1O14576 645 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 SOX15O60248 233 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 SEMA3DO95025 777 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 RCBTB2O95199 551 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 HPP00738 406 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 HOXB7P09629 217 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 GOLGA8HP0CJ92 632 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 SLC2A2P11168 524 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-213ENST00000533585 HLA-DOBP13765 273 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 CTRB1P17538 263 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 EDNRAP25101 427 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 CALML3P27482 149 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 HLA-DMAP28067 261 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 FGF9P31371 208 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-213ENST00000533585 HMGCLP35914 325 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 RANBP1P43487 201 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 PCYT1AP49585 367 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 DAP3P51398 398 aaKnown RBP3.91□□□□□ -1.78
C11orf54-213ENST00000533585 XKP51811 444 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 RIPK4P57078 832 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 AP3S2P59780 193 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 RPL10AP62906 217 aaKnown RBP3.91□□□□□ -1.78
C11orf54-213ENST00000533585 LTBQ06643 244 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 MED21Q13503 144 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 TMEM187Q14656 261 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 CD226Q15762 336 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 DGUOKQ16854 277 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 ATP6V1FQ16864 119 aa3.91□□□□□ -1.78
C11orf54-213ENST00000533585 TRMT5Q32P41 509 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms