RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 WNT11O96014 354 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 CD8AP01732 235 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 PTNP21246 168 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 SLC6A2P23975 617 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 RPS5P46782 204 aaKnown RBP13.55□□□□□ -0.24
CPSF1-211ENST00000533492 FABP6P51161 128 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 PPP2R2BQ00005 443 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 C1QTNF12Q5T7M4 302 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 CREB3L2Q70SY1 520 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 DTX2Q86UW9 622 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 FBXL14Q8N1E6 418 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 RNF217Q8TC41 542 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 ZNF607Q96SK3 696 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 DHRS9Q9BPW9 319 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 AMBRA1Q9C0C7 1298 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 GRIP2Q9C0E4 1043 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 FKRPQ9H9S5 495 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 BARX1Q9HBU1 254 aaPredicted RBP13.55□□□□□ -0.24
CPSF1-211ENST00000533492 SLC52A3Q9NQ40 469 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 ARGLU1Q9NWB6 273 aaPredicted RBP13.55□□□□□ -0.24
CPSF1-211ENST00000533492 SELENONQ9NZV5 590 aa13.55□□□□□ -0.24
CPSF1-211ENST00000533492 PRORSD1PA6NEY8 169 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 OR6C65A6NJZ3 312 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 ZNF587BE7ETH6 402 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 OR2T1O43869 369 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 SERPINB7O75635 380 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 GPX2P18283 190 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 PCSK6P29122 969 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 TTKP33981 857 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 ACVR1BP36896 505 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 SELENOPP49908 381 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 P2RY4P51582 365 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 NCALDP61601 193 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 SPOCK1Q08629 439 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 SCARB2Q14108 478 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 NIPAL3Q6P499 406 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 DHRS4L2Q6PKH6 230 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 KDM8Q8N371 416 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 DNAJA4Q8WW22 397 aaPredicted RBP13.54□□□□□ -0.24
CPSF1-211ENST00000533492 CKAP2Q8WWK9 683 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 KTI12Q96EK9 354 aaPredicted RBP13.54□□□□□ -0.24
CPSF1-211ENST00000533492 THOC1Q96FV9 657 aaKnown RBP13.54□□□□□ -0.24
CPSF1-211ENST00000533492 MAGEB18Q96M61 343 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 ADAD1Q96M93 576 aaKnown RBP13.54□□□□□ -0.24
CPSF1-211ENST00000533492 C12orf10Q9HB07 376 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 CBLN4Q9NTU7 201 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 ATP23Q9Y6H3 246 aa13.54□□□□□ -0.24
CPSF1-211ENST00000533492 HIVEP2P31629 2446 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 TLN2Q9Y4G6 2542 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 NSD1Q96L73 2696 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-211ENST00000533492 A0A1B0GWA3 101 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 RNF223E7ERA6 249 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 IGHV4-39P01824 125 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 PNMTP11086 282 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 ZNF43P17038 809 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 EGR4Q05215 589 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 NRF1Q16656 503 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 ALG10BQ5I7T1 473 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 C5orf46Q6UWT4 87 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 EPHX4Q8IUS5 362 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 C10orf111Q8N326 155 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 MUC15Q8N387 334 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 LSMEM1Q8N8F7 131 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 BHLHE22Q8NFJ8 381 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-211ENST00000533492 SLC38A4Q969I6 547 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 REG4Q9BYZ8 158 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 TMEM38AQ9H6F2 299 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 TMEM27Q9HBJ8 222 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 LEF1Q9UJU2 399 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-211ENST00000533492 GDF2Q9UK05 429 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-211ENST00000533492 TRIM33Q9UPN9 1127 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 B3GALT5Q9Y2C3 310 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 NDUFAF1Q9Y375 327 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 GMEB1Q9Y692 573 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 ALPK2Q86TB3 2170 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 PLCE1Q9P212 2302 aa13.53□□□□□ -0.24
CPSF1-211ENST00000533492 TRBV5-3A0A0A0MS03 114 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 FTCDNL1E5RQL4 147 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 AIM2O14862 343 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 ANGPT2O15123 496 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 SSX4O60224 188 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 TPST1O60507 370 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 NDUFS7O75251 213 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 LGI1O95970 557 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 AQP1P29972 269 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 CLDN17P56750 224 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 RGS8P57771 180 aaPredicted RBP13.52□□□□□ -0.25
CPSF1-211ENST00000533492 UBE2NP61088 152 aaKnown RBP13.52□□□□□ -0.25
CPSF1-211ENST00000533492 SLC25A3Q00325 362 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 IL1RL1Q01638 556 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 C1DQ13901 141 aaKnown RBP13.52□□□□□ -0.25
CPSF1-211ENST00000533492 GLIPR1L2Q4G1C9 344 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 HIKESHIQ53FT3 197 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 RUNDC3AQ59EK9 446 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 FAM69AQ5T7M9 428 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 HMBOX1Q6NT76 420 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 ZNF544Q6NX49 715 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 ULK3Q6PHR2 472 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 C6orf89Q6UWU4 347 aa13.52□□□□□ -0.25
CPSF1-211ENST00000533492 NET1Q7Z628 596 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms