RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ANKRD34AQ69YU3 496 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 ZNF100Q8IYN0 542 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 FITM2Q8N6M3 262 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 SLC25A36Q96CQ1 311 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 SLC41A3Q96GZ6 507 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 EPYCQ99645 322 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 ACTR6Q9GZN1 396 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 CLEC4MQ9H2X3 399 aaPredicted RBP18.08■□□□□ 0.49
CCS-208ENST00000533244 ZNF226Q9NYT6 803 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 SEC14L4Q9UDX3 406 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 MALT1Q9UDY8 824 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 ADAM21Q9UKJ8 722 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 ANKRD17O75179 2603 aaKnown RBP18.08■□□□□ 0.48
CCS-208ENST00000533244 DEFB108AA8MXU0 73 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 CASKO14936 926 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 SIAH2O43255 324 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 BGLAPP02818 100 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 LTBQ06643 244 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 KRT72Q14CN4 511 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 MFSD13AQ14CX5 517 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 FBXW9Q5XUX1 488 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 TMEM225Q6GV28 225 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 ADPRHL1Q8NDY3 354 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 STEAP2Q8NFT2 490 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 RNF217Q8TC41 542 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 MPP4Q96JB8 637 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 ZNF385AQ96PM9 386 aaKnown RBP18.07■□□□□ 0.48
CCS-208ENST00000533244 KCTD14Q9BQ13 255 aaPredicted RBP18.07■□□□□ 0.48
CCS-208ENST00000533244 PRSS27Q9BQR3 290 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 POLDIP3Q9BY77 421 aaKnown RBP18.07■□□□□ 0.48
CCS-208ENST00000533244 PARPBPQ9NWS1 579 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 SLC7A7Q9UM01 511 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 B3GALT5Q9Y2C3 310 aa18.07■□□□□ 0.48
CCS-208ENST00000533244 M0R082 166 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 IGHV1-2P23083 117 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 GRPRP30550 384 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 OR1E2P47887 323 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 FXNQ16595 210 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 CASP12Q6UXS9 341 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 CREB3L2Q70SY1 520 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 CBLL1Q75N03 491 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 GPAT4Q86UL3 456 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 CDC20BQ86Y33 519 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 EPHX4Q8IUS5 362 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 PGAM4Q8N0Y7 254 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 ZNF417Q8TAU3 575 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 KISS1RQ969F8 398 aaPredicted RBP18.06■□□□□ 0.48
CCS-208ENST00000533244 ZNF587Q96SQ5 575 aaPredicted RBP18.06■□□□□ 0.48
CCS-208ENST00000533244 B3GAT1Q9P2W7 334 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 CORINQ9Y5Q5 1042 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 LOC102725191A0A1B0GVB3 256 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 PDLIM1O00151 329 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 OR5F1O95221 314 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 GGT1P19440 569 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 GTF2E2P29084 291 aaKnown RBP18.06■□□□□ 0.48
CCS-208ENST00000533244 TSC22D1Q15714 1073 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 SCAIQ8N9R8 606 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 CCDC197Q8NCU1 140 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 LZICQ8WZA0 190 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 S100PBPQ96BU1 408 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 TPD52L3Q96J77 140 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 MOGAT1Q96PD6 335 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 USB1Q9BQ65 265 aaKnown RBP18.06■□□□□ 0.48
CCS-208ENST00000533244 SLC19A3Q9BZV2 496 aa18.06■□□□□ 0.48
CCS-208ENST00000533244 GSTA4O15217 222 aa18.05■□□□□ 0.48
CCS-208ENST00000533244 IGHV3-9P01782 118 aa18.05■□□□□ 0.48
CCS-208ENST00000533244 PTNP21246 168 aa18.05■□□□□ 0.48
CCS-208ENST00000533244 IL32P24001 234 aa18.05■□□□□ 0.48
CCS-208ENST00000533244 LOXP28300 417 aaPredicted RBP18.05■□□□□ 0.48
CCS-208ENST00000533244 DEF8Q6ZN54 512 aa18.05■□□□□ 0.48
CCS-208ENST00000533244 H1FNTQ75WM6 255 aaPredicted RBP18.05■□□□□ 0.48
CCS-208ENST00000533244 BHLHA15Q7RTS1 189 aaPredicted RBP18.05■□□□□ 0.48
CCS-208ENST00000533244 VTCN1Q7Z7D3 282 aa18.05■□□□□ 0.48
CCS-208ENST00000533244 SLC7A10Q9NS82 523 aa18.05■□□□□ 0.48
CCS-208ENST00000533244 MRPL39Q9NYK5 338 aaKnown RBP18.05■□□□□ 0.48
CCS-208ENST00000533244 ADA2Q9NZK5 511 aa18.05■□□□□ 0.48
CCS-208ENST00000533244 C6orf203Q9P0P8 240 aaPredicted RBP18.05■□□□□ 0.48
CCS-208ENST00000533244 PRR14LQ5THK1 2151 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 CREBBPQ92793 2442 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 A0A1W2PPR1 153 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 LRRN3E7EW58 273 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 KLF4O43474 513 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 LYZL6O75951 148 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 MT-ATP6P00846 226 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 THRBP10828 461 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 HSD17B1P14061 328 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 SLC25A3Q00325 362 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 PIN1Q13526 163 aaPredicted RBP18.04■□□□□ 0.48
CCS-208ENST00000533244 TSPO2Q5TGU0 170 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 TTC33Q6PID6 262 aaPredicted RBP18.04■□□□□ 0.48
CCS-208ENST00000533244 AAED1Q7RTV5 226 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 KDM8Q8N371 416 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 ZNF433Q8N7K0 673 aaPredicted RBP18.04■□□□□ 0.48
CCS-208ENST00000533244 ZC3HAV1LQ96H79 300 aaKnown RBP18.04■□□□□ 0.48
CCS-208ENST00000533244 OXGR1Q96P68 337 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 ASB6Q9NWX5 421 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 CD300AQ9UGN4 299 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 RIMS3Q9UJD0 308 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 AKAP6Q13023 2319 aa18.04■□□□□ 0.48
CCS-208ENST00000533244 CCDC168Q8NDH2 2452 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms