RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 TAMM41Q96BW9 452 aa20.27■□□□□ 0.84
CAPN1-222ENST00000532285 MUCL1Q96DR8 90 aa20.27■□□□□ 0.84
CAPN1-222ENST00000532285 ZNF583Q96ND8 569 aa20.27■□□□□ 0.84
CAPN1-222ENST00000532285 UBTD1Q9HAC8 227 aa20.27■□□□□ 0.84
CAPN1-222ENST00000532285 TAS2R16Q9NYV7 291 aa20.27■□□□□ 0.84
CAPN1-222ENST00000532285 UPB1Q9UBR1 384 aa20.27■□□□□ 0.84
CAPN1-222ENST00000532285 HIVEP1P15822 2718 aa20.27■□□□□ 0.84
CAPN1-222ENST00000532285 ITPR3Q14573 2671 aa20.27■□□□□ 0.83
CAPN1-222ENST00000532285 IGKV1D-42A0A075B6H8 117 aa20.26■□□□□ 0.83
CAPN1-222ENST00000532285 CIB4A0PJX0 185 aa20.26■□□□□ 0.83
CAPN1-222ENST00000532285 CCT8L1PA6NM43 557 aa20.26■□□□□ 0.83
CAPN1-222ENST00000532285 CDH12P55289 794 aa20.26■□□□□ 0.83
CAPN1-222ENST00000532285 DEFB113Q30KQ7 82 aa20.26■□□□□ 0.83
CAPN1-222ENST00000532285 ZNF613Q6PF04 617 aa20.26■□□□□ 0.83
CAPN1-222ENST00000532285 AAED1Q7RTV5 226 aa20.26■□□□□ 0.83
CAPN1-222ENST00000532285 POU5F2Q8N7G0 328 aa20.26■□□□□ 0.83
CAPN1-222ENST00000532285 OR6T1Q8NGN1 323 aa20.26■□□□□ 0.83
CAPN1-222ENST00000532285 RCN3Q96D15 328 aa20.26■□□□□ 0.83
CAPN1-222ENST00000532285 ZNF385AQ96PM9 386 aaKnown RBP20.26■□□□□ 0.83
CAPN1-222ENST00000532285 EPYCQ99645 322 aa20.26■□□□□ 0.83
CAPN1-222ENST00000532285 ELAC2Q9BQ52 826 aaKnown RBP20.26■□□□□ 0.83
CAPN1-222ENST00000532285 PRRC2AP48634 2157 aaKnown RBP20.26■□□□□ 0.83
CAPN1-222ENST00000532285 OR5H1A6NKK0 313 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 COX4I1P13073 169 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 MFSD13AQ14CX5 517 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 PPA1Q15181 289 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 TSPO2Q5TGU0 170 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 OR7E24Q6IFN5 339 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 ZNF704Q6ZNC4 412 aaPredicted RBP20.25■□□□□ 0.83
CAPN1-222ENST00000532285 C20orf204Q6ZNR8 217 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 CREB3L2Q70SY1 520 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 OR6S1Q8NH40 331 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 TMEM204Q9BSN7 226 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 ESRP2Q9H6T0 727 aaKnown RBP20.25■□□□□ 0.83
CAPN1-222ENST00000532285 SLC7A10Q9NS82 523 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 BEX4Q9NWD9 120 aaPredicted RBP20.25■□□□□ 0.83
CAPN1-222ENST00000532285 B3GALT5Q9Y2C3 310 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 AP3M1Q9Y2T2 418 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 F8P00451 2351 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 MED13LQ71F56 2210 aa20.25■□□□□ 0.83
CAPN1-222ENST00000532285 ROS1P08922 2347 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 AIM2O14862 343 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 RAD51DO75771 328 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 IFNA14P01570 189 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 CRYBA2P53672 197 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 SEC24CP53992 1094 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 NPTX1Q15818 432 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 ENTPD8Q5MY95 495 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 NCMAPQ5T1S8 102 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 P3H2Q8IVL5 708 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 POMGNT2Q8NAT1 580 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 VANGL1Q8TAA9 524 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-222ENST00000532285 PIGTQ969N2 578 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 OXGR1Q96P68 337 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 TMEM43Q9BTV4 400 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 SLCO5A1Q9H2Y9 848 aa20.24■□□□□ 0.83
CAPN1-222ENST00000532285 FAM220BPB1ANY3 271 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 PDLIM1O00151 329 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 CHP2O43745 196 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 ITGA5P08648 1049 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 ZNF43P17038 809 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 GRPRP30550 384 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 SEZ6L2Q6UXD5 910 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 H1FNTQ75WM6 255 aaPredicted RBP20.23■□□□□ 0.83
CAPN1-222ENST00000532285 ABHD12BQ7Z5M8 362 aaPredicted RBP20.23■□□□□ 0.83
CAPN1-222ENST00000532285 ARPINQ7Z6K5 226 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 RBM45Q8IUH3 476 aaKnown RBP20.23■□□□□ 0.83
CAPN1-222ENST00000532285 EPHX4Q8IUS5 362 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 OR2T12Q8NG77 320 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 PROX1Q92786 737 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 MUS81Q96NY9 551 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 NSRP1Q9H0G5 558 aaKnown RBP20.23■□□□□ 0.83
CAPN1-222ENST00000532285 EFCAB1Q9HAE3 211 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 BAG5Q9UL15 447 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 USP22Q9UPT9 525 aa20.23■□□□□ 0.83
CAPN1-222ENST00000532285 OR6C65A6NJZ3 312 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 CPSF4LA6NMK7 179 aaKnown RBP20.22■□□□□ 0.83
CAPN1-222ENST00000532285 M0R082 166 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 PLAUP00749 431 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 CD3EP07766 207 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 MPGP29372 298 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 FOXG1P55316 489 aaPredicted RBP20.22■□□□□ 0.83
CAPN1-222ENST00000532285 TGFBR3Q03167 851 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 GABRA6Q16445 453 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 LINC00114Q6XXX2 140 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 KDM8Q8N371 416 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 ADPRHL1Q8NDY3 354 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 C1orf162Q8NEQ5 155 aaPredicted RBP20.22■□□□□ 0.83
CAPN1-222ENST00000532285 OR4D11Q8NGI4 311 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 ZNF417Q8TAU3 575 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 ADAMTS16Q8TE57 1224 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 ZNF587Q96SQ5 575 aaPredicted RBP20.22■□□□□ 0.83
CAPN1-222ENST00000532285 PIP5K1AQ99755 562 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 PCDHAC1Q9H158 963 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 SEC14L4Q9UDX3 406 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 RNF115Q9Y4L5 304 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 CORINQ9Y5Q5 1042 aa20.22■□□□□ 0.83
CAPN1-222ENST00000532285 LOC102725191A0A1B0GVB3 256 aa20.21■□□□□ 0.83
CAPN1-222ENST00000532285 TRAPPC13A5PLN9 417 aa20.21■□□□□ 0.83
CAPN1-222ENST00000532285 KRT33AO76009 404 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms