RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SRSF4Q08170 494 aaKnown RBP3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 DGCR6Q14129 220 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 DPYSL3Q14195 570 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 C8orf74Q6P047 294 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 EMBQ6PCB8 327 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 FRRS1Q6ZNA5 592 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 SH2D5Q6ZV89 423 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 C16orf82Q7Z2V1 217 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 HOGA1Q86XE5 327 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 LRRC8AQ8IWT6 810 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 METTL4Q8N3J2 472 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 ZNF843Q8N446 348 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 LIX1Q8N485 282 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 NUBPLQ8TB37 319 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 PYROXD1Q8WU10 500 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 TRUB1Q8WWH5 349 aaKnown RBP3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 MYDGFQ969H8 173 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 LRRC45Q96CN5 670 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 TSSK3Q96PN8 268 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 KCTD14Q9BQ13 255 aaPredicted RBP3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 HINT2Q9BX68 163 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 OSBPL10Q9BXB5 764 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 UCK2Q9BZX2 261 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 ACTR3CQ9C0K3 210 aaPredicted RBP3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 DEFB129Q9H1M3 183 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 RBKSQ9H477 322 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 PIGUQ9H490 435 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 RNF41Q9H4P4 317 aaPredicted RBP3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 CD209Q9NNX6 404 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 MEPEQ9NQ76 525 aaPredicted RBP3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 ABCC13Q9NSE7 274 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 NKIRAS1Q9NYS0 192 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 NUDT4Q9NZJ9 180 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 SENP1Q9P0U3 644 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 WARS2Q9UGM6 360 aaKnown RBP3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 MLXQ9UH92 298 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 RNF24Q9Y225 148 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 NTNG1Q9Y2I2 539 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 CSNK1G3Q9Y6M4 447 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 ADGRA3Q8IWK6 1321 aa3.59□□□□□ -1.83
AC055878.1-201ENST00000531858 A0A1B0GTI1 187 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 PRAC2D3DTV9 90 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 RFXANKO14593 260 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 SIVA1O15304 175 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 XRCC2O43543 280 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 GMDSO60547 372 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 TOM1O60784 492 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 TRMUO75648 421 aaKnown RBP3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 ZMPSTE24O75844 475 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 AHSA1O95433 338 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 OXSR1O95747 527 aaPredicted RBP3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 CST4P01036 141 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 ATP1A1P05023 1023 aaKnown RBP3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 SERPINB2P05120 415 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 ACAA1P09110 424 aaPredicted RBP3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 WNT2P09544 360 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 NR2C1P13056 603 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 CD1DP15813 335 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 CALCRP30988 508 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 SLC26A3P40879 764 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 GPR1P46091 355 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 SSR4P51571 173 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 BLVRAP53004 296 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 GPX6P59796 221 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 MRPS15P82914 257 aaKnown RBP3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 CHRNB3Q05901 458 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 LTBQ06643 244 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 ZNF33AQ06730 810 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 ST3GAL3Q11203 375 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 STX3Q13277 289 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 MAPRE2Q15555 327 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 CARD16Q5EG05 197 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 ACER2Q5QJU3 275 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 TPRG1LQ5T0D9 272 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 C6orf183Q5T699 404 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 ZNF470Q6ECI4 717 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 SLC35E4Q6ICL7 350 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 ADAM5Q6NVV9 412 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 LCLAT1Q6UWP7 414 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 PGAP1Q75T13 922 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 CCDC71Q8IV32 467 aaPredicted RBP3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 SYS1Q8N2H4 156 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 TMEM178AQ8NBL3 297 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 LYPD6BQ8NI32 183 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 TMEM239Q8WW34 195 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 CELF6Q96J87 481 aaKnown RBP3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 HSD17B14Q9BPX1 270 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 TMEM246Q9BRR3 403 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 FAIM2Q9BWQ8 316 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 BBS2Q9BXC9 721 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 PRRG3Q9BZD7 231 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 MOB1AQ9H8S9 216 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 VCX3AQ9NNX9 186 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 IL1RAPQ9NPH3 570 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 ZNF275Q9NSD4 429 aaPredicted RBP3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 SAMSN1Q9NSI8 373 aaKnown RBP3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 B3GNT2Q9NY97 397 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 RBAKQ9NYW8 714 aaPredicted RBP3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 TAAR2Q9P1P5 351 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 ENPP5Q9UJA9 477 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms