RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 LRP11Q86VZ4 500 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 NUDCD3Q8IVD9 361 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 RIMKLAQ8IXN7 391 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 CLECL1Q8IZS7 167 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 C17orf78Q8N4C9 275 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 ZNF540Q8NDQ6 660 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 OR4A15Q8NGL6 344 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 ZNF418Q8TF45 676 aaPredicted RBP7.73□□□□□ -1.17
USF1-210ENST00000531842 CKAP2Q8WWK9 683 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 CNOT9Q92600 299 aaKnown RBP7.73□□□□□ -1.17
USF1-210ENST00000531842 BCL2L2Q92843 193 aaPredicted RBP7.73□□□□□ -1.17
USF1-210ENST00000531842 HPS1Q92902 700 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 ZNF837Q96EG3 531 aaPredicted RBP7.73□□□□□ -1.17
USF1-210ENST00000531842 SLC35G5Q96KT7 338 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 KCNS3Q9BQ31 491 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 NMUR2Q9GZQ4 415 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 TMBIM4Q9HC24 238 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 DYNLRB1Q9NP97 96 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 MYEF2Q9P2K5 600 aaKnown RBP7.73□□□□□ -1.17
USF1-210ENST00000531842 TMED7Q9Y3B3 224 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 SPIN1Q9Y657 262 aaPredicted RBP7.73□□□□□ -1.17
USF1-210ENST00000531842 A0A0A6YYJ9 748 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 IGHV2OR16-5A0A0B4J2B6 119 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 PRAMEF27A3QJZ7 478 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 OR6C65A6NJZ3 312 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 B4DSR2 109 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 SLCO1B7G3V0H7 640 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 TRIM77I1YAP6 450 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 ANKRD28O15084 1053 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 SNNO75324 88 aaPredicted RBP7.72□□□□□ -1.17
USF1-210ENST00000531842 NCR1O76036 304 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 CPSF4O95639 269 aaKnown RBP7.72□□□□□ -1.17
USF1-210ENST00000531842 AGR2O95994 175 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 WNT11O96014 354 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 SERPINE1P05121 402 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 MSMBP08118 114 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 OR12D1P0DN82 309 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 GAAP10253 952 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 NPR2P20594 1047 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 APOBEC1P41238 236 aaKnown RBP7.72□□□□□ -1.17
USF1-210ENST00000531842 SLC1A3P43003 542 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 ARFIP2P53365 341 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 ABCE1P61221 599 aaKnown RBP7.72□□□□□ -1.17
USF1-210ENST00000531842 LMO4P61968 165 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 BST1Q10588 318 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 NPRL3Q12980 569 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 MAD2L1Q13257 205 aaPredicted RBP7.72□□□□□ -1.17
USF1-210ENST00000531842 CEACAM7Q14002 265 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 OR7A5Q15622 319 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 ALKBH6Q3KRA9 238 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 OTUD3Q5T2D3 398 aaPredicted RBP7.72□□□□□ -1.17
USF1-210ENST00000531842 AVPI1Q5T686 147 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 OR4F3Q6IEY1 312 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 TYW3Q6IPR3 259 aaKnown RBP7.72□□□□□ -1.17
USF1-210ENST00000531842 TNFAIP8L2Q6P589 184 aaPredicted RBP7.72□□□□□ -1.17
USF1-210ENST00000531842 KDM8Q8N371 416 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 FAM71CQ8NEG0 241 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 C1orf162Q8NEQ5 155 aaPredicted RBP7.72□□□□□ -1.17
USF1-210ENST00000531842 VPS37AQ8NEZ2 397 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 OR9K2Q8NGE7 335 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 SLC25A43Q8WUT9 341 aaPredicted RBP7.72□□□□□ -1.17
USF1-210ENST00000531842 ZFAND2BQ8WV99 257 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 XAGE5Q8WWM1 108 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 MS4A3Q96HJ5 214 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 PPP1R36Q96LQ0 422 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 SYT3Q9BQG1 590 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 KATNB1Q9BVA0 655 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 MRPL37Q9BZE1 423 aaKnown RBP7.72□□□□□ -1.17
USF1-210ENST00000531842 OR51I1Q9H343 314 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 CENPHQ9H3R5 247 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 NOX3Q9HBY0 568 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 PNPOQ9NVS9 261 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 NOP53Q9NZM5 478 aaKnown RBP7.72□□□□□ -1.17
USF1-210ENST00000531842 TMEM181Q9P2C4 612 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 SEC14L4Q9UDX3 406 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 OSGIN1Q9UJX0 560 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 USP22Q9UPT9 525 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 SLC9A8Q9Y2E8 581 aa7.72□□□□□ -1.17
USF1-210ENST00000531842 TMEM120BA0PK00 339 aa7.71□□□□□ -1.18
USF1-210ENST00000531842 TM9SF1O15321 606 aa7.71□□□□□ -1.18
USF1-210ENST00000531842 SCN2BO60939 215 aa7.71□□□□□ -1.18
USF1-210ENST00000531842 KRT33AO76009 404 aa7.71□□□□□ -1.18
USF1-210ENST00000531842 IGLV1-44P01699 117 aa7.71□□□□□ -1.18
USF1-210ENST00000531842 SAGP10523 405 aaPredicted RBP7.71□□□□□ -1.18
USF1-210ENST00000531842 TACR3P29371 465 aa7.71□□□□□ -1.18
USF1-210ENST00000531842 CHI3L1P36222 383 aaPredicted RBP7.71□□□□□ -1.18
USF1-210ENST00000531842 GPR6P46095 362 aaPredicted RBP7.71□□□□□ -1.18
USF1-210ENST00000531842 SLC1A6P48664 564 aa7.71□□□□□ -1.18
USF1-210ENST00000531842 CLDN8P56748 225 aa7.71□□□□□ -1.18
USF1-210ENST00000531842 UBE2NP61088 152 aaKnown RBP7.71□□□□□ -1.18
USF1-210ENST00000531842 MAGOHP61326 146 aaKnown RBP7.71□□□□□ -1.18
USF1-210ENST00000531842 HPCAP84074 193 aa7.71□□□□□ -1.18
USF1-210ENST00000531842 ARF1P84077 181 aaKnown RBP7.71□□□□□ -1.18
USF1-210ENST00000531842 TGFBR3Q03167 851 aa7.71□□□□□ -1.18
USF1-210ENST00000531842 EMX2Q04743 252 aa7.71□□□□□ -1.18
USF1-210ENST00000531842 SRSF4Q08170 494 aaKnown RBP7.71□□□□□ -1.18
USF1-210ENST00000531842 SNTB2Q13425 540 aaKnown RBP7.71□□□□□ -1.18
USF1-210ENST00000531842 PDCD2Q16342 344 aaPredicted RBP7.71□□□□□ -1.18
USF1-210ENST00000531842 ARHGAP11BQ3KRB8 267 aa7.71□□□□□ -1.18
USF1-210ENST00000531842 NIPAL3Q6P499 406 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms