RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 JMJD1CQ15652 2540 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 OR6C65A6NJZ3 312 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 ZNF587BE7ETH6 402 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 ATP6V1G2-DDX39BF2Z307 99 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 CLIC1O00299 241 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 KRT33AO76009 404 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 AHSA1O95433 338 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 NUDT7P0C024 238 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 BMP2P12643 396 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 BMP4P12644 408 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 HOXB9P17482 250 aaPredicted RBP14.7□□□□□ -0.06
CPSF1-207ENST00000531727 SELENOPP49908 381 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 CHRNB3Q05901 458 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 FADDQ13158 208 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 SLC2A7Q6PXP3 512 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 EPGNQ6UW88 154 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 HIPK1Q86Z02 1210 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 OR1K1Q8NGR3 316 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 MFSD8Q8NHS3 518 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 BBS10Q8TAM1 723 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 TMEM45AQ9NWC5 275 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 MOKQ9UQ07 419 aa14.7□□□□□ -0.06
CPSF1-207ENST00000531727 ELOA3DA6NLF2 546 aaPredicted RBP14.69□□□□□ -0.06
CPSF1-207ENST00000531727 FTCDNL1E5RQL4 147 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 GPRIN2O60269 458 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 LGI1O95970 557 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 MRPL19P49406 292 aaKnown RBP14.69□□□□□ -0.06
CPSF1-207ENST00000531727 EFNA4P52798 201 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 HOXC5Q00444 222 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 LGALS3BPQ08380 585 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 ELOA3BQ3SY89 546 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 TBRG1Q3YBR2 411 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 NIPAL3Q6P499 406 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 CXXC5Q7LFL8 322 aaKnown RBP14.69□□□□□ -0.06
CPSF1-207ENST00000531727 EPHX4Q8IUS5 362 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 ZNF525Q8N782 197 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 GOLGA6L1Q8N7Z2 621 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 ELOA3Q8NG57 546 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 MAL2Q969L2 176 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 PTDSS2Q9BVG9 487 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 PMF1-BGLAPU3KQ54 211 aa14.69□□□□□ -0.06
CPSF1-207ENST00000531727 FBN1P35555 2871 aaKnown RBP14.69□□□□□ -0.06
CPSF1-207ENST00000531727 IGHV1-18A0A0C4DH31 117 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 A8MV72 311 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-207ENST00000531727 C5orf58C9J3I9 102 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 PNMTP11086 282 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 SLC25A16P16260 332 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 PAX7P23759 505 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 STX1BP61266 288 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 EGR4Q05215 589 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 LOXL1Q08397 574 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-207ENST00000531727 TMEM249Q2WGJ8 235 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 C6orf89Q6UWU4 347 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 LINGO2Q7L985 606 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 FAM168AQ92567 244 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 BCL2L2Q92843 193 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-207ENST00000531727 SLC25A36Q96CQ1 311 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 ALKBH3Q96Q83 286 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-207ENST00000531727 SLC38A2Q96QD8 506 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 TNFRSF13CQ96RJ3 184 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 LINC00470Q9BZP3 86 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 C12orf10Q9HB07 376 aa14.68□□□□□ -0.06
CPSF1-207ENST00000531727 HEATR1Q9H583 2144 aaKnown RBP14.68□□□□□ -0.06
CPSF1-207ENST00000531727 PLCE1Q9P212 2302 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 ARPC4-TTLL3A0A0A6YYG9 625 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 FZD7O75084 574 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 ERLIN1O75477 346 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 UPK3AO75631 287 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 CSF3P09919 207 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 ETS2P15036 469 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 GTF2E2P29084 291 aaKnown RBP14.67□□□□□ -0.06
CPSF1-207ENST00000531727 PRKAR1BP31321 381 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 RPS5P46782 204 aaKnown RBP14.67□□□□□ -0.06
CPSF1-207ENST00000531727 UBE2NP61088 152 aaKnown RBP14.67□□□□□ -0.06
CPSF1-207ENST00000531727 SWI5Q1ZZU3 235 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 MST1LQ2TV78 715 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 BEND6Q5SZJ8 279 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-207ENST00000531727 LRIF1Q5T3J3 769 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 C6orf52Q5T4I8 152 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 FUNDC1Q8IVP5 155 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 KDM8Q8N371 416 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 MAGEE2Q8TD90 523 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-207ENST00000531727 KTI12Q96EK9 354 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-207ENST00000531727 C7orf26Q96N11 449 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 ZNF317Q96PQ6 595 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-207ENST00000531727 KCNS3Q9BQ31 491 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 KATNB1Q9BVA0 655 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 TCF7L2Q9NQB0 619 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 SLC25A37Q9NYZ2 338 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 RPS6KB2Q9UBS0 482 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 CUBNO60494 3623 aa14.67□□□□□ -0.06
CPSF1-207ENST00000531727 ABCA1O95477 2261 aa14.66□□□□□ -0.06
CPSF1-207ENST00000531727 POLR3GO15318 223 aaPredicted RBP14.66□□□□□ -0.06
CPSF1-207ENST00000531727 TGDSO95455 350 aa14.66□□□□□ -0.06
CPSF1-207ENST00000531727 ARAFP10398 606 aa14.66□□□□□ -0.06
CPSF1-207ENST00000531727 ZNF43P17038 809 aa14.66□□□□□ -0.06
CPSF1-207ENST00000531727 SH3BGRP55822 239 aaPredicted RBP14.66□□□□□ -0.06
CPSF1-207ENST00000531727 CLDN17P56750 224 aa14.66□□□□□ -0.06
CPSF1-207ENST00000531727 VLDLRP98155 873 aa14.66□□□□□ -0.06
CPSF1-207ENST00000531727 C3orf36Q3SXR2 165 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms