RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 RPF2Q9H7B2 306 aaKnown RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 SH2D2AQ9NP31 389 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 CD274Q9NZQ7 290 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 TXNDC16Q9P2K2 825 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 ZNF629Q9UEG4 869 aaPredicted RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 PHF11Q9UIL8 331 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 PTBP2Q9UKA9 531 aaKnown RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 ZNF490Q9ULM2 529 aaPredicted RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 SNX12Q9UMY4 172 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 FBN1P35555 2871 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 TUBAL3A6NHL2 446 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 OR6C76A6NM76 312 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 SAP18O00422 153 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 RTCAO00442 366 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 SH3BGRLO75368 114 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 TRAPPC6AO75865 159 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 KDM4BO94953 1096 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 EPPINO95925 133 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 IGKV3-11P04433 115 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 HIST1H2ABP04908 130 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 T-ENOLP0DO92 83 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 CD1DP15813 335 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 STMN1P16949 149 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 TCP1P17987 556 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 CD22P20273 847 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 IVDP26440 423 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 GDF1P27539 372 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 CEACAM8P31997 349 aaPredicted RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 GCKP35557 465 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 TIMP3P35625 211 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 TMED10P49755 219 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 DSCR9P59020 149 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 HERVK_113P63132 956 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 ERVK-8P63133 956 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 RPP38P78345 283 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 PHEXP78562 749 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 DR1Q01658 176 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 TNFRSF17Q02223 184 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 EGR4Q05215 589 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 PDIA2Q13087 525 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 KEAP1Q14145 624 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 EBPQ15125 230 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 FBXO48Q5FWF7 155 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 KHDRBS2Q5VWX1 349 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 GGNBP1Q5YKI7 109 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 OR4C11Q6IEV9 310 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 SHQ1Q6PI26 577 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 RBPMS2Q6ZRY4 209 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 HIST3H2AQ7L7L0 130 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 GPR180Q86V85 440 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 OR4N5Q8IXE1 308 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 ST13P4Q8IZP2 240 aaPredicted RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 TMCO5AQ8N6Q1 288 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 ZNF473Q8WTR7 871 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 NUDCD2Q8WVJ2 157 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 EXT2Q93063 718 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 ESAMQ96AP7 390 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 PPWD1Q96BP3 646 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 GRAMD2BQ96HH9 432 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 SH3GL2Q99962 352 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 ERVK-6Q9BXR3 956 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 WWTR1Q9GZV5 400 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 WDR41Q9HAD4 459 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 SEBOXQ9HB31 216 aaPredicted RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 LYARQ9NX58 379 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 NUDT4Q9NZJ9 180 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 OPTCQ9UBM4 332 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 MALT1Q9UDY8 824 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 KCNS2Q9ULS6 477 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 ERVK-19Q9WJR5 959 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 RPH3AQ9Y2J0 694 aaPredicted RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 CHCHD2Q9Y6H1 151 aaPredicted RBP4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 VPS13CQ709C8 3753 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 HIVEP2P31629 2446 aa4.54□□□□□ -1.68
AMBRA1-209ENST00000529963 IGKV2D-30A0A075B6S6 120 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 C2orf92A0A1B0GVN3 265 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 RNF212BA8MTL3 300 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 SUPT3HB4E1H0 165 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 EEF1E1-BLOC1S5C9J1V9 151 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 E7ESA3 106 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 K7EPI3 171 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 OGG1O15527 345 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 ZSCAN12O43309 604 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 EEF1E1O43324 174 aaKnown RBP4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 CDH16O75309 829 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 TRIM3O75382 744 aaPredicted RBP4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 SUPT3HO75486 399 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 SNX4O95219 450 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 LRATO95237 230 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 WISP3O95389 354 aaPredicted RBP4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 GPR75O95800 540 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 C1QAP02745 245 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 FCGR1AP12314 374 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 EPORP19235 508 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 ANXA7P20073 488 aaKnown RBP4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 OPRM1P35372 400 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 CDK9P50750 372 aaKnown RBP4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 ZNF136P52737 540 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 ARFIP1P53367 373 aa4.53□□□□□ -1.68
AMBRA1-209ENST00000529963 BRWD1-AS2P59051 145 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms