RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	RNH1	P13489	461 aa	Known RBP	21.4	■■□□□ 1.02
GSDMD-208	ENST00000528475	CCR9	P51686	369 aa		21.4	■■□□□ 1.02
GSDMD-208	ENST00000528475	PPP1CA	P62136	330 aa		21.4	■■□□□ 1.02
GSDMD-208	ENST00000528475	SLC6A19	Q695T7	634 aa		21.4	■■□□□ 1.02
GSDMD-208	ENST00000528475	ZNF440	Q8IYI8	595 aa		21.4	■■□□□ 1.02
GSDMD-208	ENST00000528475	MARVELD3	Q96A59	401 aa		21.4	■■□□□ 1.02
GSDMD-208	ENST00000528475	C3orf49	Q96BT1	292 aa		21.4	■■□□□ 1.02
GSDMD-208	ENST00000528475	RADIL	Q96JH8	1075 aa		21.4	■■□□□ 1.02
GSDMD-208	ENST00000528475	SPACA7	Q96KW9	195 aa		21.4	■■□□□ 1.02
GSDMD-208	ENST00000528475	SORCS2	Q96PQ0	1159 aa		21.4	■■□□□ 1.02
GSDMD-208	ENST00000528475	C20orf85	Q9H1P6	137 aa		21.4	■■□□□ 1.02
GSDMD-208	ENST00000528475	NANS	Q9NR45	359 aa		21.4	■■□□□ 1.02
GSDMD-208	ENST00000528475	SCP2D1	Q9UJQ7	156 aa		21.4	■■□□□ 1.02
GSDMD-208	ENST00000528475	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	21.39	■■□□□ 1.02
GSDMD-208	ENST00000528475	HRK	O00198	91 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	KHNYN	O15037	678 aa	Known RBP	21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	LINC01565	O15544	149 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	NDUFB5	O43674	189 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	TSC22D2	O75157	780 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	CT45A8	P0DMV1	189 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	CT45A9	P0DMV2	189 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	RPL6	Q02878	288 aa	Known RBP	21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	CT45A2	Q5DJT8	189 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	ELFN2	Q5R3F8	820 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	SEZ6L2	Q6UXD5	910 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	ZNF595	Q8IYB9	648 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	ZNF680	Q8NEM1	530 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	ZPLD1	Q8TCW7	415 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	RNF166	Q96A37	237 aa	Predicted RBP	21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	SLC25A38	Q96DW6	304 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	DLL4	Q9NR61	685 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	POMT2	Q9UKY4	750 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	AUP1	Q9Y679	476 aa		21.39	■■□□□ 1.01
GSDMD-208	ENST00000528475	TGM6	O95932	706 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	ADRB1	P08588	477 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	ST6GAL1	P15907	406 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	PBX2	P40425	430 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	GPR3	P46089	330 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	TPMT	P51580	245 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	SLC25A1	P53007	311 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	AP3S2	P59780	193 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	RIPPLY1	Q0D2K3	151 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	STX4	Q12846	297 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	PRTG	Q2VWP7	1150 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	OR6K6	Q8NGW6	343 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	LIPH	Q8WWY8	451 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	RASD2	Q96D21	266 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	SMAD5	Q99717	465 aa	Known RBP	21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	HRASLS	Q9HDD0	168 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	LRIT1	Q9P2V4	623 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	MRPS33	Q9Y291	106 aa	Known RBP	21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	APEH	P13798	732 aa	Known RBP	21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	ARPC4	P59998	168 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	ERVK-25	P63136	954 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	NDUFAF6	Q330K2	333 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	LINGO2	Q7L985	606 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	KCTD20	Q7Z5Y7	419 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	IZUMO1	Q8IYV9	350 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	MS4A3	Q96HJ5	214 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	ZNF578	Q96N58	590 aa	Predicted RBP	21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	RBCK1	Q9BYM8	510 aa		21.38	■■□□□ 1.01
GSDMD-208	ENST00000528475	C10orf142	B7Z368	130 aa		21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	IMPA2	O14732	288 aa		21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	RABIF	P47224	123 aa		21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	EPHA4	P54764	986 aa		21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	NANOS3	P60323	173 aa	Known RBP	21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	MRPS10	P82664	201 aa	Known RBP	21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	HES5	Q5TA89	166 aa		21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	SFTPA2	Q8IWL1	248 aa		21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	PIAS4	Q8N2W9	510 aa	Predicted RBP	21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	BCORP1	Q8N888	145 aa		21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	OR13H1	Q8NG92	308 aa		21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	ADAMTS18	Q8TE60	1221 aa		21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	RGP1	Q92546	391 aa	Predicted RBP	21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	KLHL9	Q9P2J3	617 aa		21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	SLC6A5	Q9Y345	797 aa		21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475		V9GY05	133 aa		21.37	■■□□□ 1.01
GSDMD-208	ENST00000528475	IGKV1D-42	A0A075B6H8	117 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475		A0A1W2PQ72	361 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	CTSB	P07858	339 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	RAB40AL	P0C0E4	278 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	CALCB	P10092	127 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	MNDA	P41218	407 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	SKP1	P63208	163 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	MRPS21	P82921	87 aa	Known RBP	21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	ZNF267	Q14586	743 aa	Predicted RBP	21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	EXD3	Q8N9H8	876 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	FAM71C	Q8NEG0	241 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	OR11G2	Q8NGC1	345 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	OR4C3	Q8NH37	302 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	RAB40A	Q8WXH6	277 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	DGAT2	Q96PD7	388 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	ALG12	Q9BV10	488 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	TCEAL2	Q9H3H9	227 aa	Predicted RBP	21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	RXFP3	Q9NSD7	469 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	MOK	Q9UQ07	419 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	HIF3A	Q9Y2N7	669 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475	CLDN16	Q9Y5I7	305 aa		21.36	■■□□□ 1.01
GSDMD-208	ENST00000528475		A0A0A6YYC8	382 aa	Predicted RBP	21.36	■■□□□ 1.01

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms