RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 GRIP2Q9C0E4 1043 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 OBP2BQ9NPH6 170 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 DLL4Q9NR61 685 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 ZNF701Q9NV72 531 aaPredicted RBP8.47□□□□□ -1.05
CHD7-208ENST00000528280 TESQ9UGI8 421 aaKnown RBP8.47□□□□□ -1.05
CHD7-208ENST00000528280 B3GALT5Q9Y2C3 310 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 AMDHD2Q9Y303 409 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 AKAP6Q13023 2319 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 FN1P02751 2386 aaKnown RBP8.47□□□□□ -1.05
CHD7-208ENST00000528280 STAB1Q9NY15 2570 aa8.46□□□□□ -1.05
CHD7-208ENST00000528280 FBN1P35555 2871 aaKnown RBP8.46□□□□□ -1.05
CHD7-208ENST00000528280 LOC102725191A0A1B0GVB3 256 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 ZC3H12DA2A288 527 aaKnown RBP8.46□□□□□ -1.06
CHD7-208ENST00000528280 KIAA1324LA8MWY0 1029 aaPredicted RBP8.46□□□□□ -1.06
CHD7-208ENST00000528280 TMEM229AB2RXF0 380 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 CLOCKO15516 846 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 AKAP8O43823 692 aaKnown RBP8.46□□□□□ -1.06
CHD7-208ENST00000528280 FMO6PO60774 539 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 BMP4P12644 408 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 ZNF43P17038 809 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 ARFIP2P53365 341 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 PRPS1P60891 318 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 RPS4XP62701 263 aaKnown RBP8.46□□□□□ -1.06
CHD7-208ENST00000528280 NFYCQ13952 458 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 MAPRE2Q15555 327 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 GABRA6Q16445 453 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 CYP51A1Q16850 503 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 MMEL1Q495T6 779 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 ZNF672Q499Z4 452 aaPredicted RBP8.46□□□□□ -1.06
CHD7-208ENST00000528280 COQ5Q5HYK3 327 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 ALG10BQ5I7T1 473 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 SWT1Q5T5J6 900 aaKnown RBP8.46□□□□□ -1.06
CHD7-208ENST00000528280 FAM69AQ5T7M9 428 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 KLHL24Q6TFL4 600 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 CREB3L2Q70SY1 520 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 CXXC5Q7LFL8 322 aaKnown RBP8.46□□□□□ -1.06
CHD7-208ENST00000528280 DHDDSQ86SQ9 333 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 PATL1Q86TB9 770 aaKnown RBP8.46□□□□□ -1.06
CHD7-208ENST00000528280 GPAT4Q86UL3 456 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 PRIMA1Q86XR5 153 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 PCYOX1LQ8NBM8 494 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 ANKK1Q8NFD2 765 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 SLC26A7Q8TE54 656 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 SMAP2Q8WU79 429 aaPredicted RBP8.46□□□□□ -1.06
CHD7-208ENST00000528280 SLC25A36Q96CQ1 311 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 OXGR1Q96P68 337 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 CGREF1Q99674 301 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 SLCO5A1Q9H2Y9 848 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 ZNF385DQ9H6B1 395 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 ADPRHL2Q9NX46 363 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 CHST2Q9Y4C5 530 aa8.46□□□□□ -1.06
CHD7-208ENST00000528280 HRNRQ86YZ3 2850 aaPredicted RBP8.45□□□□□ -1.06
CHD7-208ENST00000528280 TRAV36DV7A0A075B6V5 113 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 A0A087WUJ7 227 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 DPRXA6NFQ7 191 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 BBIP1A8MTZ0 92 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 M0QX08 132 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 PDLIM1O00151 329 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 AIM2O14862 343 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 RAD51DO75771 328 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 MFN2O95140 757 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 LGI1O95970 557 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 PLAUP00749 431 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 IFNA14P01570 189 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 IGHV3-9P01782 118 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 INHBBP09529 407 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 NTF4P34130 210 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 PTH2RP49190 550 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 SH3BGRP55822 239 aaPredicted RBP8.45□□□□□ -1.06
CHD7-208ENST00000528280 RGS8P57771 180 aaPredicted RBP8.45□□□□□ -1.06
CHD7-208ENST00000528280 GNGT1P63211 74 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 BSPH1Q075Z2 132 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 BNIP2Q12982 314 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 C1DQ13901 141 aaKnown RBP8.45□□□□□ -1.06
CHD7-208ENST00000528280 ADRM1Q16186 407 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 Q5PR19 223 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 AGAP6Q5VW22 663 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 ZNF613Q6PF04 617 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 H1FNTQ75WM6 255 aaPredicted RBP8.45□□□□□ -1.06
CHD7-208ENST00000528280 YTHDF3Q7Z739 585 aaKnown RBP8.45□□□□□ -1.06
CHD7-208ENST00000528280 ZIC4Q8N9L1 334 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 WFDC11Q8NEX6 87 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 DNAJA3Q96EY1 480 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 THOC1Q96FV9 657 aaKnown RBP8.45□□□□□ -1.06
CHD7-208ENST00000528280 ECSITQ9BQ95 431 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 CPPED1Q9BRF8 314 aaPredicted RBP8.45□□□□□ -1.06
CHD7-208ENST00000528280 LINC00470Q9BZP3 86 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 AMBRA1Q9C0C7 1298 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 ALG2Q9H553 416 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 KAT8Q9H7Z6 458 aaKnown RBP8.45□□□□□ -1.06
CHD7-208ENST00000528280 FKRPQ9H9S5 495 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 SLC7A10Q9NS82 523 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 GID8Q9NWU2 228 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 CISD1Q9NZ45 108 aaKnown RBP8.45□□□□□ -1.06
CHD7-208ENST00000528280 LAMP3Q9UQV4 416 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 RCE1Q9Y256 329 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 AP3M1Q9Y2T2 418 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 CORINQ9Y5Q5 1042 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 SLC25A15Q9Y619 301 aa8.45□□□□□ -1.06
CHD7-208ENST00000528280 DSCAMO60469 2012 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms