RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 IFT52Q9Y366 437 aa15.27■□□□□ 0.04
CKLF-CMTM1-202ENST00000527845 B9A039 149 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 LMX1BO60663 402 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 AHSA1O95433 338 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 BCHEP06276 602 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 TFPTP0C1Z6 253 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 GKN3PP0CG01 181 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 IGHV4-31P0DP07 118 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 ZNF16P17020 682 aaPredicted RBP15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 CDH2P19022 906 aaPredicted RBP15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 GTF2E2P29084 291 aaKnown RBP15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 IL12AP29459 219 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 ACAA2P42765 397 aaKnown RBP15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 CRATP43155 626 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 DSTNP60981 165 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 HIKESHIQ53FT3 197 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 TNFAIP8L3Q5GJ75 292 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 C1orf140Q5VVS0 124 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 FAM166AQ6J272 317 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 FAM169BQ8N8A8 192 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 ZNF540Q8NDQ6 660 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 ANKK1Q8NFD2 765 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 HTRA1Q92743 480 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 LINC00470Q9BZP3 86 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 CENPHQ9H3R5 247 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 THAP1Q9NVV9 213 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 CRNNQ9UBG3 495 aaPredicted RBP15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 ARFGEF3Q5TH69 2177 aa15.26■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 IGHV1-18A0A0C4DH31 117 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 A0A0G2JPF8 293 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 LOC390937A0A1W2PQ73 354 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 VSTM5A8MXK1 200 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 HNRNPCL2B2RXH8 293 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 HNRNPCL3B7ZW38 293 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 HNRNPCL1O60812 293 aaKnown RBP15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 C1QCP02747 245 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 HNRNPCL4P0DMR1 293 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 HNF1AP20823 631 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 SERPINF1P36955 418 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 CEP85LQ5SZL2 805 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 ANKRD16Q6P6B7 361 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 C5orf46Q6UWT4 87 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 CREB3L2Q70SY1 520 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 SLC46A3Q7Z3Q1 461 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 VRK2Q86Y07 508 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 OR4F15Q8NGB8 312 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 MFSD8Q8NHS3 518 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 ITCHQ96J02 903 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 PAIP2Q9BPZ3 127 aaKnown RBP15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 SPATA9Q9BWV2 254 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 RAD21L1Q9H4I0 556 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 CA10Q9NS85 328 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 RLIMQ9NVW2 624 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 ZIM2Q9NZV7 527 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 RCE1Q9Y256 329 aa15.25■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 VWC2LB2RUY7 222 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 TMEM229AB2RXF0 380 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 NPIPB7O75200 414 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 SLC22A3O75751 556 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 ERCC1P07992 297 aaPredicted RBP15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 ETFAP13804 333 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 EPHA3P29320 983 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 NR4A2P43354 598 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 PPOXP50336 477 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 P2RY4P51582 365 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 MVDP53602 400 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 MAPK11Q15759 364 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 EFNB3Q15768 340 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 ATG16L1Q676U5 607 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 NIPAL3Q6P499 406 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 SLC38A5Q8WUX1 472 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 NANOS1Q8WY41 292 aaKnown RBP15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 C3orf49Q96BT1 292 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 SORCS2Q96PQ0 1159 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 ALKBH3Q96Q83 286 aaPredicted RBP15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 TPT1P8Q9HAU6 139 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 CUBNO60494 3623 aa15.24■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 KLF11O14901 512 aa15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 AKAP8O43823 692 aaKnown RBP15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 LGI1O95970 557 aa15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 APEHP13798 732 aaKnown RBP15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 SRD5A1P18405 259 aa15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 SELENOPP49908 381 aa15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 BNIP2Q12982 314 aa15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 MPP2Q14168 576 aa15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 GGTLC2Q14390 218 aa15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 MST1LQ2TV78 715 aa15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 NXNQ6DKJ4 435 aa15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 BCL2L2Q92843 193 aaPredicted RBP15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 TMEM19Q96HH6 336 aa15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 RAB1BQ9H0U4 201 aa15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 WDR55Q9H6Y2 383 aaPredicted RBP15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 C12orf10Q9HB07 376 aa15.23■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 RPL36A-HNRNPH2H7BZ11 118 aa15.22■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 OR2T1O43869 369 aa15.22■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 FZD7O75084 574 aa15.22■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 SNNO75324 88 aaPredicted RBP15.22■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 SLC43A1O75387 559 aa15.22■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 IGKV3-15P01624 115 aa15.22■□□□□ 0.03
CKLF-CMTM1-202ENST00000527845 IGLV1-44P01699 117 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms