RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 MARVELD1Q9BSK0 173 aa14□□□□□ -0.17
USH1C-207ENST00000527720 UBE2ZQ9H832 354 aaPredicted RBP14□□□□□ -0.17
USH1C-207ENST00000527720 A0A0B4J293 547 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 TEX13CA0A0J9YWL9 993 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 A0A1W2PQD3 144 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 BLOC1S5-TXNDC5H3BN57 136 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 FLRT2O43155 660 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 DUX1O43812 170 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 SELENOFO60613 162 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 SLC43A1O75387 559 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 EDNRAP25101 427 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 RPS11P62280 158 aaKnown RBP eCLIP13.99□□□□□ -0.17
USH1C-207ENST00000527720 EGR4Q05215 589 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 ALG10Q5BKT4 473 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 LINC01590Q5TEZ4 76 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 YOD1Q5VVQ6 348 aaPredicted RBP13.99□□□□□ -0.17
USH1C-207ENST00000527720 SLC6A19Q695T7 634 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 LEG1Q6P5S2 330 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 KCTD20Q7Z5Y7 419 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 UBE2J2Q8N2K1 259 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 OR6K6Q8NGW6 343 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 ZNRF4Q8WWF5 429 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 RFT1Q96AA3 541 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 CLIP3Q96DZ5 547 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 RNF31Q96EP0 1072 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 CMTM3Q96MX0 182 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 ALG12Q9BV10 488 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 ADAM19Q9H013 955 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 COPS3Q9UNS2 423 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 ABCA7Q8IZY2 2146 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 RP1P56715 2156 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 CENPXA8MT69 81 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 RGS13O14921 159 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 TO15178 435 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 SDC3O75056 442 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 FZD7O75084 574 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 AQP2P41181 271 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 SLC25A35Q3KQZ1 300 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 GXYLT1Q4G148 440 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 ZNF57Q68EA5 555 aaPredicted RBP13.99□□□□□ -0.17
USH1C-207ENST00000527720 GPR135Q8IZ08 494 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 C10orf53Q8N6V4 93 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 EXD3Q8N9H8 876 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 OR13C5Q8NGS8 318 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 ZNF563Q8TA94 476 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 ZPLD1Q8TCW7 415 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 DAZLQ92904 295 aaKnown RBP13.99□□□□□ -0.17
USH1C-207ENST00000527720 TSLPQ969D9 159 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 Q96M85 177 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 THAP7Q9BT49 309 aaPredicted RBP13.99□□□□□ -0.17
USH1C-207ENST00000527720 WACQ9BTA9 647 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 TTYH1Q9H313 450 aaPredicted RBP13.99□□□□□ -0.17
USH1C-207ENST00000527720 DDX28Q9NUL7 540 aaKnown RBP13.99□□□□□ -0.17
USH1C-207ENST00000527720 ACOXLQ9NUZ1 547 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 UCKL1Q9NWZ5 548 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 RABL2AQ9UBK7 228 aaPredicted RBP13.99□□□□□ -0.17
USH1C-207ENST00000527720 RABL2BQ9UNT1 228 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 ADAMTS20P59510 1910 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 SEC16AO15027 2179 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 EYSQ5T1H1 3165 aa13.99□□□□□ -0.17
USH1C-207ENST00000527720 A8MU76 341 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 A8MUA0 341 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 ZNF879B4DU55 563 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 EPXP11678 715 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 FBLP22087 321 aaKnown RBP13.98□□□□□ -0.17
USH1C-207ENST00000527720 MST1P26927 711 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 CDKN2AP42771 156 aaKnown RBP13.98□□□□□ -0.17
USH1C-207ENST00000527720 OR1D5P58170 312 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 MRPL28Q13084 256 aaKnown RBP13.98□□□□□ -0.17
USH1C-207ENST00000527720 TATDN3Q17R31 274 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 BAIAP2L2Q6UXY1 529 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 SLC16A9Q7RTY1 509 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 KMT5CQ86Y97 462 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 OR1L3Q8NH93 324 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 TRIM63Q969Q1 353 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 CREB3L1Q96BA8 519 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 MOGAT1Q96PD6 335 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 ADOQ96SZ5 270 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 TTTY10Q9BZA0 68 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 HDHD2Q9H0R4 259 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 FKRPQ9H9S5 495 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 ZNF304Q9HCX3 659 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 RXFP3Q9NSD7 469 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 TEKT2Q9UIF3 430 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 A0A1B0GTQ1 180 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 ORC5O43913 435 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 EIF4E2O60573 245 aaKnown RBP13.98□□□□□ -0.17
USH1C-207ENST00000527720 TACSTD2P09758 323 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 IL12BP29460 328 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 CTXN1P60606 82 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 GPLD1P80108 840 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 EBPQ15125 230 aaKnown RBP13.98□□□□□ -0.17
USH1C-207ENST00000527720 SMAD2Q15796 467 aaKnown RBP13.98□□□□□ -0.17
USH1C-207ENST00000527720 CEP78Q5JTW2 689 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 ZNF684Q5T5D7 378 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 HLA-DQA1Q5Y7H0 255 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 IL20RBQ6UXL0 311 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 SLC35F3Q8IY50 421 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.98□□□□□ -0.17
USH1C-207ENST00000527720 CAPSLQ8WWF8 208 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms