RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CBFBQ13951 182 aa17.01■□□□□ 0.31
SMPD1-203ENST00000527275 TMEM44Q2T9K0 475 aa17.01■□□□□ 0.31
SMPD1-203ENST00000527275 WBP2NLQ6ICG8 309 aa17.01■□□□□ 0.31
SMPD1-203ENST00000527275 THSD4Q6ZMP0 1018 aa17.01■□□□□ 0.31
SMPD1-203ENST00000527275 LNX2Q8N448 690 aa17.01■□□□□ 0.31
SMPD1-203ENST00000527275 HAS2Q92819 552 aa17.01■□□□□ 0.31
SMPD1-203ENST00000527275 RFKQ969G6 155 aa17.01■□□□□ 0.31
SMPD1-203ENST00000527275 TNFRSF13CQ96RJ3 184 aa17.01■□□□□ 0.31
SMPD1-203ENST00000527275 IFT27Q9BW83 186 aa17.01■□□□□ 0.31
SMPD1-203ENST00000527275 FBXL2Q9UKC9 423 aa17.01■□□□□ 0.31
SMPD1-203ENST00000527275 IGLV3-32A0A0A0MS00 114 aa17■□□□□ 0.31
SMPD1-203ENST00000527275 IRGMA1A4Y4 181 aa17■□□□□ 0.31
SMPD1-203ENST00000527275 CDH11P55287 796 aa17■□□□□ 0.31
SMPD1-203ENST00000527275 ARG2P78540 354 aa17■□□□□ 0.31
SMPD1-203ENST00000527275 NANOGP1Q8N7R0 232 aa17■□□□□ 0.31
SMPD1-203ENST00000527275 ZNF563Q8TA94 476 aa17■□□□□ 0.31
SMPD1-203ENST00000527275 JSRP1Q96MG2 331 aaPredicted RBP17■□□□□ 0.31
SMPD1-203ENST00000527275 MND1Q9BWT6 205 aa17■□□□□ 0.31
SMPD1-203ENST00000527275 HES7Q9BYE0 225 aa17■□□□□ 0.31
SMPD1-203ENST00000527275 RNF32Q9H0A6 362 aa17■□□□□ 0.31
SMPD1-203ENST00000527275 DEPPQ9NTK1 212 aa17■□□□□ 0.31
SMPD1-203ENST00000527275 H2AFY2Q9P0M6 372 aaPredicted RBP17■□□□□ 0.31
SMPD1-203ENST00000527275 M0R3G1 203 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 AIREO43918 545 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 CDC40O60508 579 aaKnown RBP eCLIP16.99■□□□□ 0.31
SMPD1-203ENST00000527275 SNX4O95219 450 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 PGCP20142 388 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 NCS1P62166 190 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 SLC35F1Q5T1Q4 408 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 NXNL2Q5VZ03 156 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 CPOQ8IVL8 374 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 PROKR2Q8NFJ6 384 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 NDNFQ8TB73 568 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 GPR119Q8TDV5 335 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 SGTBQ96EQ0 304 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 GNRHR2Q96P88 292 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 FGF20Q9NP95 211 aaPredicted RBP16.99■□□□□ 0.31
SMPD1-203ENST00000527275 LSM2Q9Y333 95 aaKnown RBP16.99■□□□□ 0.31
SMPD1-203ENST00000527275 CSAG2Q9Y5P2 127 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 GADD45AP24522 165 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 TMPRSS3P57727 454 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 FOXK2Q01167 660 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 SPHARQ15513 63 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 ARSKQ6UWY0 536 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 PLCZ1Q86YW0 608 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 MDS2Q8NDY4 140 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 TBC1D15Q8TC07 691 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 HINT3Q9NQE9 182 aaKnown RBP16.99■□□□□ 0.31
SMPD1-203ENST00000527275 KLHL1Q9NR64 748 aa16.99■□□□□ 0.31
SMPD1-203ENST00000527275 CDK2AP1O14519 115 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 APOL3O95236 402 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 WISP1O95388 367 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 MSX1P28360 303 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 CLK1P49759 484 aaKnown RBP16.98■□□□□ 0.31
SMPD1-203ENST00000527275 QPRTQ15274 297 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 TSTQ16762 297 aaKnown RBP16.98■□□□□ 0.31
SMPD1-203ENST00000527275 PAQR6Q6TCH4 344 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 IGFL2Q6UWQ7 119 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 CXXC5Q7LFL8 322 aaKnown RBP16.98■□□□□ 0.31
SMPD1-203ENST00000527275 BBS1Q8NFJ9 593 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 OR2M3Q8NG83 312 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 OTULINQ96BN8 352 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 SMAD5Q99717 465 aaKnown RBP16.98■□□□□ 0.31
SMPD1-203ENST00000527275 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.98■□□□□ 0.31
SMPD1-203ENST00000527275 VDAC3Q9Y277 283 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 A0A087WV48 116 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 ANKUB1A6NFN9 424 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 ELOA3DA6NLF2 546 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-203ENST00000527275 MYL12BO14950 172 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 TRIM3O75382 744 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-203ENST00000527275 PNMTP11086 282 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 SLC1A3P43003 542 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 ETV1P50549 477 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 UCNP55089 124 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 SUMO3P55854 103 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-203ENST00000527275 FHL1Q13642 323 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 DOC2BQ14184 412 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 ELOA3BQ3SY89 546 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 TIGD3Q6B0B8 471 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 FADS6Q8N9I5 356 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 ELOA3Q8NG57 546 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 ZCCHC14Q8WYQ9 949 aaKnown RBP16.98■□□□□ 0.31
SMPD1-203ENST00000527275 SLC39A7Q92504 469 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 TMEM41AQ96HV5 264 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 FN3KQ9H479 309 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 MCCC2Q9HCC0 563 aa16.98■□□□□ 0.31
SMPD1-203ENST00000527275 CHCHD3Q9NX63 227 aaKnown RBP16.98■□□□□ 0.31
SMPD1-203ENST00000527275 FAM183AA6NL82 134 aa16.97■□□□□ 0.31
SMPD1-203ENST00000527275 SNPHO15079 494 aa16.97■□□□□ 0.31
SMPD1-203ENST00000527275 MYL12AP19105 171 aa16.97■□□□□ 0.31
SMPD1-203ENST00000527275 CNR1P21554 472 aa16.97■□□□□ 0.31
SMPD1-203ENST00000527275 HTR1FP30939 366 aa16.97■□□□□ 0.31
SMPD1-203ENST00000527275 TNFSF10P50591 281 aa16.97■□□□□ 0.31
SMPD1-203ENST00000527275 PLBD1Q6P4A8 553 aa16.97■□□□□ 0.31
SMPD1-203ENST00000527275 ATG4DQ86TL0 474 aaPredicted RBP16.97■□□□□ 0.31
SMPD1-203ENST00000527275 OR4K17Q8NGC6 315 aa16.97■□□□□ 0.31
SMPD1-203ENST00000527275 OR1J4Q8NGS1 313 aa16.97■□□□□ 0.31
SMPD1-203ENST00000527275 OPALINQ96PE5 141 aa16.97■□□□□ 0.31
SMPD1-203ENST00000527275 SLC19A3Q9BZV2 496 aa16.97■□□□□ 0.31
SMPD1-203ENST00000527275 RACGAP1Q9H0H5 632 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms