RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 HBA1P69905 142 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 RPP30P78346 268 aaKnown RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 EFNB1P98172 346 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 HSPB3Q12988 150 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 TMED1Q13445 227 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 PRICKLE4Q2TBC4 344 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 SFT2D3Q587I9 215 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 ZNF628Q5EBL2 1059 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 COQ5Q5HYK3 327 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 PAGE3Q5JUK9 113 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 SERTAD4-AS1Q5TG53 156 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 FAM69BQ5VUD6 431 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 ZNF324BQ6AW86 544 aaPredicted RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 TYW3Q6IPR3 259 aaKnown RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 BHLHB9Q6PI77 547 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 FAM198BQ6UWH4 519 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 C6orf89Q6UWU4 347 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 ISLR2Q6UXK2 745 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 DGAT2L6Q6ZPD8 337 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 LANCL3Q6ZV70 420 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 NDUFAF7Q7L592 441 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 ANKRD37Q7Z713 158 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 RAB43Q86YS6 212 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 IQCF2Q8IXL9 164 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 CLECL1Q8IZS7 167 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 TRIML2Q8N7C3 387 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 NEXN-AS1Q8NBZ9 246 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 C11orf65Q8NCR3 313 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 MORN4Q8NDC4 146 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 ZNF248Q8NDW4 579 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 OR4A15Q8NGL6 344 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 OR9A2Q8NGT5 310 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 DOK4Q8TEW6 326 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 PTPMT1Q8WUK0 201 aaPredicted RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 ZFAND2BQ8WV99 257 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 KCNE4Q8WWG9 221 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 GTF2H4Q92759 462 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 DAZLQ92904 295 aaKnown RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 TSLPQ969D9 159 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 MOAP1Q96BY2 351 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 LRRC58Q96CX6 371 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 PERPQ96FX8 193 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 SENP5Q96HI0 755 aaPredicted RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 TXNDC15Q96J42 360 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 MAGED4Q96JG8 741 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 ART5Q96L15 291 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 CCDC115Q96NT0 180 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 IP6K3Q96PC2 410 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 ABHD1Q96SE0 405 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 LPAR4Q99677 370 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 NPAS2Q99743 824 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 SH3GL1Q99961 368 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 HOPXQ9BPY8 73 aaPredicted RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 FUZQ9BT04 418 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 INPP5KQ9BT40 448 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 THUMPD3Q9BV44 507 aaKnown RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 KLHL4Q9C0H6 718 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 SLCO5A1Q9H2Y9 848 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 CXorf21Q9HAI6 301 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 IL1RL2Q9HB29 575 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 ADAP2Q9NPF8 381 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 SNTG1Q9NSN8 517 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 IL17BQ9UHF5 180 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 BCAP29Q9UHQ4 241 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 ERVK-11Q9UQG0 969 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 SEC16AO15027 2179 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 CUL9Q8IWT3 2517 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 LOC102723996A0A087X1L8 192 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 IGHV1-45A0A0A0MS14 117 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 NSG1A0A0A6YYJ2 146 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 A4D1N5 150 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 ASPDHA6ND91 283 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 DUXAA6NLW8 204 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 EVPLLA8MZ36 301 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 UPK1AO00322 258 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 SOCS6O14544 535 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 MRASO14807 208 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 RRP8O43159 456 aaKnown RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 ZFAND5O76080 213 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 KRT75O95678 551 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 CT62P0C5K7 136 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 ZCCHC18P0CG32 403 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 S1PR1P21453 382 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 PPIBP23284 216 aaKnown RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 SOAT1P35610 550 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 CHI3L1P36222 383 aaPredicted RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 EIF2S3P41091 472 aaKnown RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 CDKN2CP42773 168 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 CDK9P50750 372 aaKnown RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 EFNA3P52797 238 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 EEF1A2Q05639 463 aaKnown RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 DMTNQ08495 405 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 FUT7Q11130 342 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 BNIP1Q12981 228 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 CAMK2DQ13557 499 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 IRF3Q14653 427 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 LTB4RQ15722 352 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 EXT1Q16394 746 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 TRMT12Q53H54 448 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms