RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 N6AMT1Q9Y5N5 214 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 SLCO1B1Q9Y6L6 691 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 PLXNA2O75051 1894 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 ANKRD36A6QL64 1941 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 CEP192Q8TEP8 1941 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 MUC3AQ02505 3323 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 F5P12259 2224 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 A0A0J9YVX5 310 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 TRBV2A0A0J9YWF9 115 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 FAM47DPA6NHR8 397 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 USP27XA6NNY8 438 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 MIF4GDA9UHW6 222 aaKnown RBP3.03□□□□□ -1.92
CD44-219ENST00000525685 APOC4-APOC2K7ER74 178 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 KCNK1O00180 336 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 VEGFDO43915 354 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 NME2P1O60361 137 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 SYNGR4O95473 234 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 GOT2P00505 430 aaKnown RBP3.03□□□□□ -1.92
CD44-219ENST00000525685 APOC2P02655 101 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 IGHV4-34P06331 123 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 RETP07949 1114 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 MELTFP08582 738 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 ABHD2P08910 425 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 ADRB3P13945 408 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 FOLR2P14207 255 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 GNSP15586 552 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 CCNCP24863 283 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 HMGCLP35914 325 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 HSPA9P38646 679 aaKnown RBP3.03□□□□□ -1.92
CD44-219ENST00000525685 RWDD2BP57060 319 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 SRP54P61011 504 aaKnown RBP3.03□□□□□ -1.92
CD44-219ENST00000525685 AP1S1P61966 158 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 OTUD4Q01804 1114 aaKnown RBP3.03□□□□□ -1.92
CD44-219ENST00000525685 RAD51Q06609 339 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 CCDC173Q0VFZ6 552 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 BNIP1Q12981 228 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 TFDP2Q14188 446 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 IHHQ14623 411 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 RFTN1Q14699 578 aaPredicted RBP3.03□□□□□ -1.92
CD44-219ENST00000525685 PDK1Q15118 436 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 SF3A2Q15428 464 aaKnown RBP3.03□□□□□ -1.92
CD44-219ENST00000525685 ANKRD55Q3KP44 614 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 SLC22A6Q4U2R8 563 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 SEL1L2Q5TEA6 688 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 MARC1Q5VT66 337 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 ADCK1Q86TW2 530 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 TRIM69Q86WT6 500 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 HPS6Q86YV9 775 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 BBS5Q8N3I7 341 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 UBL4BQ8N7F7 174 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 OR2T34Q8NGX1 318 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 ACTL9Q8TC94 416 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 ITLN1Q8WWA0 313 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 SLCO4A1Q96BD0 722 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 BIRC7Q96CA5 298 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 ECHDC3Q96DC8 303 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 ZBED6CLQ96FA7 236 aaPredicted RBP3.03□□□□□ -1.92
CD44-219ENST00000525685 DTD2Q96FN9 168 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 TSGA13Q96PP4 275 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 QKIQ96PU8 341 aaKnown RBP eCLIP3.03□□□□□ -1.92
CD44-219ENST00000525685 ALS2CR12Q96Q35 445 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 PSKH2Q96QS6 385 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 RUFY1Q96T51 708 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 POLR1EQ9GZS1 481 aaKnown RBP3.03□□□□□ -1.92
CD44-219ENST00000525685 ABCG8Q9H221 673 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 NEUROG2Q9H2A3 272 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 Q9HAA7 133 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 SGK2Q9HBY8 427 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 NT5MQ9NPB1 228 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 DYRK4Q9NR20 520 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 RBM22Q9NW64 420 aaKnown RBP eCLIP3.03□□□□□ -1.92
CD44-219ENST00000525685 ARMCX1Q9P291 453 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 TBK1Q9UHD2 729 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 CIDEBQ9UHD4 219 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 BLOC1S6Q9UL45 172 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 PYCARDQ9ULZ3 195 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.03□□□□□ -1.92
CD44-219ENST00000525685 RRP15Q9Y3B9 282 aaKnown RBP3.03□□□□□ -1.92
CD44-219ENST00000525685 FADS3Q9Y5Q0 445 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 SHROOM3Q8TF72 1996 aa3.03□□□□□ -1.92
CD44-219ENST00000525685 TTC28Q96AY4 2481 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 MYO18AQ92614 2054 aaKnown RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 THADAQ6YHU6 1953 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 SCN8AQ9UQD0 1980 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 FOXI3A8MTJ6 420 aaPredicted RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 HACD1B0YJ81 288 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 RAD51BO15315 384 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 LATO43561 262 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 LRP3O75074 770 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 RHBDL1O75783 438 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 RENP00797 406 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 JCHAINP01591 159 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 PROS1P07225 676 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 ZNF806P0C7X5 589 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 CCNB1P14635 433 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 MAT2AP31153 395 aaKnown RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 CD86P42081 329 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 CSNK1DP48730 415 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 IST1P53990 364 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 RAG2P55895 527 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms