RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 RASGRF2O14827 1237 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 KIR2DS1Q14954 304 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 STK11Q15831 433 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 PLBD1Q6P4A8 553 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 SLC26A11Q86WA9 606 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 OR2L13Q8N349 312 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 HTR3CQ8WXA8 447 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 TM4SF19Q96DZ7 209 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 BMFQ96LC9 184 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 OSBPL11Q9BXB4 747 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 RNF167Q9H6Y7 350 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 WDR76Q9H967 626 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 ZFP14Q9HCL3 533 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 SLC40A1Q9NP59 571 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 NINJ2Q9NZG7 142 aa2.37□□□□□ -2.03
COPB1-203ENST00000525214 TRAV40A0A0B4J280 105 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 ZNF705GA8MUZ8 300 aaPredicted RBP2.36□□□□□ -2.03
COPB1-203ENST00000525214 PEX7O00628 323 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 RCBTB2O95199 551 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 POU2F1P14859 743 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 NPY1RP25929 384 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 UBE2AP49459 152 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 CACNG7P62955 275 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 TP53I3Q53FA7 332 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 ZNF880Q6PDB4 577 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 ZNF547Q8IVP9 402 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 C15orf56Q8N910 161 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 CCDC54Q8NEL0 328 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 MGARPQ8TDB4 240 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 CMTM7Q96FZ5 175 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 SEC22AQ96IW7 307 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 NIPSNAP3BQ9BS92 247 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 SPNS1Q9H2V7 528 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 MEAF6Q9HAF1 191 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 PCYOX1Q9UHG3 505 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 KNSTRNQ9Y448 316 aa2.36□□□□□ -2.03
COPB1-203ENST00000525214 DHX57Q6P158 1386 aaKnown RBP2.36□□□□□ -2.03
COPB1-203ENST00000525214 NSG1A0A0A6YYJ2 146 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 A0A1W2PNV4 684 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 RBMY1BA6NDE4 496 aaKnown RBP2.35□□□□□ -2.03
COPB1-203ENST00000525214 RBMY1EA6NEQ0 496 aaKnown RBP2.35□□□□□ -2.03
COPB1-203ENST00000525214 TRIM64A6NGJ6 449 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 TRIM64BA6NI03 449 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 NEBLO76041 1014 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 IGHG4P01861 327 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 IGKV4-1P06312 121 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 RBMY1DP0C7P1 496 aaKnown RBP2.35□□□□□ -2.03
COPB1-203ENST00000525214 RBMY1A1P0DJD3 496 aaKnown RBP2.35□□□□□ -2.03
COPB1-203ENST00000525214 PGAM1P18669 254 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 COX5AP20674 150 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 GUCA2BQ16661 112 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 SLC25A52Q3SY17 297 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 MARCH8Q5T0T0 291 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 PGAM4Q8N0Y7 254 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 LRRC43Q8N309 656 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 ITCHQ96J02 903 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 TMEM237Q96Q45 408 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 DBNDD1Q9H9R9 158 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 OR12D3Q9UGF7 316 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 MOSPD1Q9UJG1 213 aa2.35□□□□□ -2.03
COPB1-203ENST00000525214 RNF103-CHMP3A0A140T963 221 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 GSAPA4D1B5 854 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 HIP1O00291 1037 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 SLC31A2O15432 143 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 MT-ND3P03897 115 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 NT5EP21589 574 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 GDI1P31150 447 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 ACADVLP49748 655 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 HMGCS1Q01581 520 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 SMARCB1Q12824 385 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 CYTH1Q15438 398 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 SGCAQ16586 387 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 PRSS8Q16651 343 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 Q6ZN92 141 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 SHISA6Q6ZSJ9 500 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 GET4Q7L5D6 327 aaPredicted RBP2.34□□□□□ -2.03
COPB1-203ENST00000525214 NEGR1Q7Z3B1 354 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 CLDN19Q8N6F1 224 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 OR52P1PQ8NH57 321 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 FAM3CQ92520 227 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 CCDC47Q96A33 483 aaKnown RBP2.34□□□□□ -2.03
COPB1-203ENST00000525214 NOX3Q9HBY0 568 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 ZNF222Q9UK12 451 aa2.34□□□□□ -2.03
COPB1-203ENST00000525214 C12orf77C9JDV5 145 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 NPIPA7E9PJI5 369 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 RPL36A-HNRNPH2H7BZ11 118 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 KLK3P07288 261 aaPredicted RBP2.33□□□□□ -2.04
COPB1-203ENST00000525214 NPIPA8P0DM63 369 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 STMN1P16949 149 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 ATP6V1E1P36543 226 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 GGTA1PQ4G0N0 100 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 ACOT1Q86TX2 421 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 GRAMD2AQ8IUY3 354 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 UBALD2Q8IYN6 164 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 ARL10Q8N8L6 244 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 ACTRT1Q8TDG2 376 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 SMARCD2Q92925 531 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 FAM111AQ96PZ2 611 aa2.33□□□□□ -2.04
COPB1-203ENST00000525214 MRPL45Q9BRJ2 306 aaKnown RBP2.33□□□□□ -2.04
COPB1-203ENST00000525214 ZNF416Q9BWM5 594 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms