RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 HLA-GP17693 338 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 PSMC3P17980 439 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 XRCC1P18887 633 aaPredicted RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 IDSP22304 550 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 IFNA8P32881 189 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 TNFSF9P41273 254 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 NSG1P42857 185 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 SLC1A1P43005 524 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 QARSP47897 775 aaKnown RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 CSNK1A1P48729 337 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 PRLHRP49683 370 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 NKX2-5P52952 324 aaPredicted RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 RAB4BP61018 213 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 RPS15AP62244 130 aaKnown RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 ZNF33AQ06730 810 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 SRSF1Q07955 248 aaKnown RBP eCLIP3.94□□□□□ -1.78
CD44-213ENST00000525209 SCRN3Q0VDG4 424 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 TRAF2Q12933 501 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 TMED2Q15363 201 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 CTF1Q16619 201 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 ISXQ2M1V0 245 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 RPEL1Q2QD12 228 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 BEAN1Q3B7T3 259 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 YIF1BQ5BJH7 314 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 DMRTC1Q5HYR2 192 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 SOHLH1Q5JUK2 328 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 SLC35D3Q5M8T2 416 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 BEND6Q5SZJ8 279 aaPredicted RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 IDNKQ5T6J7 187 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 PRAMEF17Q5VTA0 474 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 C1orf189Q5VU69 101 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 KIAA0895LQ68EN5 471 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 TCEAL6Q6IPX3 200 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 SPOPLQ6IQ16 392 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 PRR5LQ6MZQ0 368 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 ACSM5Q6NUN0 579 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 CERS6Q6ZMG9 384 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 LCNL1Q6ZST4 164 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 RFPL4BQ6ZWI9 263 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 TIPARPQ7Z3E1 657 aaKnown RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 SLC35F2Q8IXU6 374 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 C10orf67Q8IYJ2 551 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 DCP1BQ8IZD4 617 aaKnown RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 CYP4Z2PQ8N1L4 340 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 SLC39A11Q8N1S5 342 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 DHRSXQ8N5I4 330 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 RELL2Q8NC24 303 aaPredicted RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 NOXO1Q8NFA2 376 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 OR10V1Q8NGI7 309 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 TMEM163Q8TC26 289 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 WFIKKN2Q8TEU8 576 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 PNPLA2Q96AD5 504 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 TMEM143Q96AN5 459 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 RPEQ96AT9 228 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 ZNF75AQ96N20 296 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 MBOAT7Q96N66 472 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 TIMP4Q99727 224 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 ATP5SQ99766 215 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 NIPSNAP3BQ9BS92 247 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 LAT2Q9GZY6 243 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 DEFB129Q9H1M3 183 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 EBF3Q9H4W6 596 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 PLEKHA1Q9HB21 404 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 AKIP1Q9NQ31 210 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 C19orf12Q9NSK7 152 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 EIF3KQ9UBQ5 218 aaKnown RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 SPATA2Q9UM82 520 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 ICAM5Q9UMF0 924 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 STUB1Q9UNE7 303 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 SLC17A4Q9Y2C5 497 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 WIF1Q9Y5W5 379 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 ALG6Q9Y672 507 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 MRPS18BQ9Y676 258 aaKnown RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 SAR1BQ9Y6B6 198 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 NHSL1Q5SYE7 1610 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 PTPN23Q9H3S7 1636 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 TET3O43151 1660 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 RALGAPBQ86X10 1494 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 RGPD1P0DJD0 1748 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 CPDO75976 1380 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 MROH1Q8NDA8 1641 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 FUOMA2VDF0 154 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 OR5K3A6NET4 321 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 NPIPB8E9PQR5 432 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 FZD7O75084 574 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 NDUFS7O75251 213 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 KHDRBS3O75525 346 aaKnown RBP3.93□□□□□ -1.78
CD44-213ENST00000525209 RBMXL2O75526 392 aaKnown RBP3.93□□□□□ -1.78
CD44-213ENST00000525209 ATP5LO75964 103 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 GJB5O95377 273 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 TNFAIP8O95379 198 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 PLEKHA8P1O95397 391 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 TTLL1O95922 423 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 IFNA5P01569 189 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 IGHG4P01861 327 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 SP1P08047 785 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 RPS17P08708 135 aaKnown RBP3.93□□□□□ -1.78
CD44-213ENST00000525209 PRSS56P0CW18 603 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 COX5BP10606 129 aa3.93□□□□□ -1.78
CD44-213ENST00000525209 H2AFXP16104 143 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms