RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 CCNA2P20248 432 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 SLC7A1P30825 629 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 RGS8P57771 180 aaPredicted RBP11.08□□□□□ -0.64
SMCO4-202ENST00000525141 SELENOWP63302 87 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 H3F3AP84243 136 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 SLC25A3Q00325 362 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 SHEQ5VZ18 495 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 ZNF704Q6ZNC4 412 aaPredicted RBP11.08□□□□□ -0.64
SMCO4-202ENST00000525141 STK32CQ86UX6 486 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 RANBP3LQ86VV4 465 aaPredicted RBP11.08□□□□□ -0.64
SMCO4-202ENST00000525141 LRRC75A-AS1Q8N1F1 130 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 CADM2Q8N3J6 435 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 STEAP2Q8NFT2 490 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 OR52E4Q8NGH9 312 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 NEUROG1Q92886 237 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 PIGTQ969N2 578 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 C3orf49Q96BT1 292 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 DDIT4LQ96D03 193 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 KCNK17Q96T54 332 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 CDRT15Q96T59 188 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 ARHGDIGQ99819 225 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 KCTD14Q9BQ13 255 aaPredicted RBP11.08□□□□□ -0.64
SMCO4-202ENST00000525141 POTEKPQ9BYX7 375 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 ADA2Q9NZK5 511 aa11.08□□□□□ -0.64
SMCO4-202ENST00000525141 ALPK2Q86TB3 2170 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 ZANQ9Y493 2812 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 IGKV3D-15A0A087WSY6 115 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 ZC3H12DA2A288 527 aaKnown RBP11.07□□□□□ -0.64
SMCO4-202ENST00000525141 TMEM229AB2RXF0 380 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 CXCR6O00574 342 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 DNPH1O43598 174 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 TPST2O60704 377 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 SMPD2O60906 423 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 TFPIP10646 304 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 PNMTP11086 282 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 HSD17B1P14061 328 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 FPR1P21462 350 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 IGHV1-2P23083 117 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 FOXG1P55316 489 aaPredicted RBP11.07□□□□□ -0.64
SMCO4-202ENST00000525141 NCALDP61601 193 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 CSNK2A1P68400 391 aaPredicted RBP11.07□□□□□ -0.64
SMCO4-202ENST00000525141 MXRA7P84157 204 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 HOXC5Q00444 222 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 ITGADQ13349 1161 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 P2RY6Q15077 328 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 PDK3Q15120 406 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 FXNQ16595 210 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 CYBRD1Q53TN4 286 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 SAMD4BQ5PRF9 694 aaKnown RBP11.07□□□□□ -0.64
SMCO4-202ENST00000525141 NCMAPQ5T1S8 102 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 ABLIM2Q6H8Q1 611 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 ULK3Q6PHR2 472 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 C6orf89Q6UWU4 347 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 Q6ZT83 130 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 DEFB107AQ8IZN7 70 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 ARHGAP24Q8N264 748 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 LZICQ8WZA0 190 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 HSD17B8Q92506 261 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 PROX1Q92786 737 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 SLC38A4Q969I6 547 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 C18orf12Q96KH6 178 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 WFDC6Q9BQY6 131 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 PCDHAC1Q9H158 963 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 C1orf21Q9H246 121 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 TMEM27Q9HBJ8 222 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 KLHL9Q9P2J3 617 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 GMPR2Q9P2T1 348 aaKnown RBP11.07□□□□□ -0.64
SMCO4-202ENST00000525141 RPS6KB2Q9UBS0 482 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 CD300AQ9UGN4 299 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 SLC9A8Q9Y2E8 581 aa11.07□□□□□ -0.64
SMCO4-202ENST00000525141 CSPG4Q6UVK1 2322 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 A0A1B0GWA3 101 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 A8MVM7 634 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 PMS2P2O95744 297 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 PAX1P15863 534 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 GGT1P19440 569 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 HTR2AP28223 471 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 OR1Q1Q15612 314 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 SWT1Q5T5J6 900 aaKnown RBP11.06□□□□□ -0.64
SMCO4-202ENST00000525141 GLYATQ6IB77 296 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 ALKBH2Q6NS38 261 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 ADAM5Q6NVV9 412 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 ZNF613Q6PF04 617 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 C5orf46Q6UWT4 87 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 PRSS57Q6UWY2 283 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 C20orf204Q6ZNR8 217 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 Q71RC1 249 aaPredicted RBP11.06□□□□□ -0.64
SMCO4-202ENST00000525141 BHLHA15Q7RTS1 189 aaPredicted RBP11.06□□□□□ -0.64
SMCO4-202ENST00000525141 ZNF433Q8N7K0 673 aaPredicted RBP11.06□□□□□ -0.64
SMCO4-202ENST00000525141 ZNF611Q8N823 705 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 RBM15BQ8NDT2 890 aaKnown RBP11.06□□□□□ -0.64
SMCO4-202ENST00000525141 OR6T1Q8NGN1 323 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 STK35Q8TDR2 534 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 AKAP1Q92667 903 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMCO4-202ENST00000525141 SLC47A1Q96FL8 570 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 MCHR1Q99705 422 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 CCL19Q99731 98 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 PRR14Q9BWN1 585 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 GORASP2Q9H8Y8 452 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 ZNF701Q9NV72 531 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms