RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 OR2W3Q7Z3T1 314 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 SETD3Q86TU7 594 aaPredicted RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 PIGZQ86VD9 579 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 CRLF3Q8IUI8 442 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 TMEM199Q8N511 208 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 NOXO1Q8NFA2 376 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 OR1K1Q8NGR3 316 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 RPEQ96AT9 228 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 SMIM10Q96HG1 83 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 UTP23Q9BRU9 249 aaKnown RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 SLC35A5Q9BS91 424 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 DGCR6LQ9BY27 220 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 SYT4Q9H2B2 425 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ZNF334Q9HCZ1 680 aaPredicted RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 VCX3AQ9NNX9 186 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 EIF3KQ9UBQ5 218 aaKnown RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 ZNF282Q9UDV7 671 aaPredicted RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 MRPS28Q9Y2Q9 187 aaKnown RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 KCNIP3Q9Y2W7 256 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 HYOU1Q9Y4L1 999 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 LRRC42Q9Y546 428 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 SAR1BQ9Y6B6 198 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 AQRO60306 1485 aaKnown RBP eCLIP3.43□□□□□ -1.863e-6■■□□□ 13.8
SKP1-209ENST00000522552 RAD50Q92878 1312 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ERI2A8K979 691 aaKnown RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 INAFM1C9JVW0 142 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 NEDD8-MDP1E9PL57 170 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 PRMT5O14744 637 aaPredicted RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 AQP9O43315 295 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 TOM1O60784 492 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 PLEKHA8P1O95397 391 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 LDOC1O95751 146 aaPredicted RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 HOXB7P09629 217 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 CDH1P12830 882 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 RPL35AP18077 110 aaKnown RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 FASP25445 335 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 PDHA2P29803 388 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 HOXD3P31249 432 aaPredicted RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 TNFSF9P41273 254 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ACTR1BP42025 376 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 CSNK1DP48730 415 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 FUT6P51993 359 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 KPNA2P52292 529 aaKnown RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 ACTBP60709 375 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ACTA2P62736 377 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ACTG1P63261 375 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ACTG2P63267 376 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ACTC1P68032 377 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ACTA1P68133 377 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 PITPNAQ00169 270 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 IFFO1Q0D2I5 559 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 PTGR1Q14914 329 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ZBTB6Q15916 424 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ZSCAN26Q16670 478 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 NDUFA9Q16795 377 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 DGUOKQ16854 277 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 PRTGQ2VWP7 1150 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 TRIM16LQ309B1 348 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ZNF260Q3ZCT1 412 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 OR8G2PQ6IF36 304 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ADNP2Q6IQ32 1131 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 SPESP1Q6UW49 350 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ZNF66Q6ZN08 573 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ABHD13Q7L211 337 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 TIPARPQ7Z3E1 657 aaKnown RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 FUNDC1Q8IVP5 155 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ZBED8Q8IZ13 594 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 SLC22A15Q8IZD6 547 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 OR1S2Q8NGQ3 325 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 OR6N2Q8NGY6 317 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 OR4Q3Q8NH05 313 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 OR6X1Q8NH79 312 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ZPLD1Q8TCW7 415 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 TMEM143Q96AN5 459 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 DNAJA3Q96EY1 480 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 C2orf48Q96LS8 159 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 BEX2Q9BXY8 128 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 CHRNA10Q9GZZ6 450 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 NXF3Q9H4D5 531 aaKnown RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 FKBP14Q9NWM8 211 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 RMND1Q9NWS8 449 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 MAP3K15Q6ZN16 1313 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 IGLV5-52A0A0A0MRZ9 124 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 ZNF724A8MTY0 619 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 TRDCB7Z8K6 153 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 FCN1O00602 326 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 TNFSF11O14788 317 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 PPP1R2P9O14990 202 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 SEMA3DO95025 777 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 RPP14O95059 124 aaKnown RBP3.42□□□□□ -1.86
SKP1-209ENST00000522552 PMS2P2O95744 297 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 HLA-DRAP01903 254 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 EDNRAP25101 427 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 FGF9P31371 208 aaPredicted RBP3.42□□□□□ -1.86
SKP1-209ENST00000522552 RPS14P62263 151 aaKnown RBP3.42□□□□□ -1.86
SKP1-209ENST00000522552 PLP2Q04941 152 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 ST3GAL3Q11203 375 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 TMEM187Q14656 261 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 UAP1Q16222 522 aaPredicted RBP3.42□□□□□ -1.86
SKP1-209ENST00000522552 UPP1Q16831 310 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms