RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 ALPK2Q86TB3 2170 aa12□□□□□ -0.49
CLK4-210ENST00000522136 HTR3EA5X5Y0 456 aa12□□□□□ -0.49
CLK4-210ENST00000522136 CXCL13O43927 109 aa12□□□□□ -0.49
CLK4-210ENST00000522136 ZNF708P17019 499 aa12□□□□□ -0.49
CLK4-210ENST00000522136 EIF1AXP47813 144 aaKnown RBP12□□□□□ -0.49
CLK4-210ENST00000522136 CRISP1P54107 249 aa12□□□□□ -0.49
CLK4-210ENST00000522136 CARD18P57730 90 aa12□□□□□ -0.49
CLK4-210ENST00000522136 KLRB1Q12918 225 aa12□□□□□ -0.49
CLK4-210ENST00000522136 CLEC12AQ5QGZ9 265 aa12□□□□□ -0.49
CLK4-210ENST00000522136 ZNF324BQ6AW86 544 aaPredicted RBP12□□□□□ -0.49
CLK4-210ENST00000522136 ESPNLQ6ZVH7 1005 aa12□□□□□ -0.49
CLK4-210ENST00000522136 NANOGNBQ7Z5D8 188 aa12□□□□□ -0.49
CLK4-210ENST00000522136 KDM8Q8N371 416 aa12□□□□□ -0.49
CLK4-210ENST00000522136 IQCF1Q8N6M8 205 aa12□□□□□ -0.49
CLK4-210ENST00000522136 TMEM99Q8N816 258 aa12□□□□□ -0.49
CLK4-210ENST00000522136 OR6S1Q8NH40 331 aa12□□□□□ -0.49
CLK4-210ENST00000522136 OR10D3Q8NH80 312 aa12□□□□□ -0.49
CLK4-210ENST00000522136 OR2V1Q8NHB1 315 aa12□□□□□ -0.49
CLK4-210ENST00000522136 FANK1Q8TC84 345 aa12□□□□□ -0.49
CLK4-210ENST00000522136 SNRNP40Q96DI7 357 aaKnown RBP12□□□□□ -0.49
CLK4-210ENST00000522136 ZNF845Q96IR2 970 aaPredicted RBP12□□□□□ -0.49
CLK4-210ENST00000522136 GABARAPL3Q9BY60 117 aa12□□□□□ -0.49
CLK4-210ENST00000522136 PLSCR2Q9NRY7 297 aa12□□□□□ -0.49
CLK4-210ENST00000522136 FAM118AQ9NWS6 357 aa12□□□□□ -0.49
CLK4-210ENST00000522136 TAS2R5Q9NYW4 299 aa12□□□□□ -0.49
CLK4-210ENST00000522136 IL20Q9NYY1 176 aa12□□□□□ -0.49
CLK4-210ENST00000522136 TRAPPC4Q9Y296 219 aa12□□□□□ -0.49
CLK4-210ENST00000522136 IGHV3-15A0A0B4J1V0 119 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 A0A1B0GVC2 190 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 NPIPA2E9PIF3 369 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 C11orf98E9PRG8 122 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 NPIPA3F8WFD2 350 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 H0YJX3 145 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 RAMP1O60894 148 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 PMS2P2O95744 297 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 CLIC3O95833 236 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 SLC9A3P48764 834 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 NUP107P57740 925 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 RPS4XP62701 263 aaKnown RBP11.99□□□□□ -0.49
CLK4-210ENST00000522136 PMS2P3Q13401 168 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 PTGES3Q15185 160 aaKnown RBP11.99□□□□□ -0.49
CLK4-210ENST00000522136 RFX4Q33E94 735 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 SMARCD3Q6STE5 483 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 CCDC103Q8IW40 242 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 DHRSXQ8N5I4 330 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 OR5J2Q8NH18 312 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 WDYHV1Q96HA8 205 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 UCN2Q96RP3 112 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 ZNF184Q99676 751 aaPredicted RBP11.99□□□□□ -0.49
CLK4-210ENST00000522136 ASPNQ9BXN1 380 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 GRIP2Q9C0E4 1043 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 ALKBH4Q9NXW9 302 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 CDH10Q9Y6N8 788 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 PRRC2CQ9Y520 2896 aaKnown RBP11.99□□□□□ -0.49
CLK4-210ENST00000522136 ITPR1Q14643 2758 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 MCIDASD6RGH6 385 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 PLPP3O14495 311 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 F13BP05160 661 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 SFTPCP11686 197 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 CDH2P19022 906 aaPredicted RBP11.99□□□□□ -0.49
CLK4-210ENST00000522136 ENPP1P22413 925 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 GTF2E2P29084 291 aaKnown RBP11.99□□□□□ -0.49
CLK4-210ENST00000522136 UQCRC1P31930 480 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 ESRRGP62508 458 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 RPL18Q07020 188 aaKnown RBP11.99□□□□□ -0.49
CLK4-210ENST00000522136 BCL2A1Q16548 175 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 H1FNTQ75WM6 255 aaPredicted RBP11.99□□□□□ -0.49
CLK4-210ENST00000522136 FGD2Q7Z6J4 655 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 FAR1Q8WVX9 515 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 GPR137Q96N19 417 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 ZNF570Q96NI8 536 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 RDH12Q96NR8 316 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 ADI1Q9BV57 179 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 TSSK6Q9BXA6 273 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 CHST11Q9NPF2 352 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 TBC1D23Q9NUY8 699 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 ASF1BQ9NVP2 202 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 MRPL39Q9NYK5 338 aaKnown RBP11.99□□□□□ -0.49
CLK4-210ENST00000522136 CAMK2AQ9UQM7 478 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 HIF3AQ9Y2N7 669 aa11.99□□□□□ -0.49
CLK4-210ENST00000522136 BSNQ9UPA5 3926 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 MS4A18H0YCH9 400 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 AQP7O14520 342 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 SERPINI2O75830 405 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 RCBTB2O95199 551 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 GNAO1P09471 354 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 TSPAN19P0C672 248 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 ADORA3P0DMS8 318 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 AHCYP23526 432 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 P2RY4P51582 365 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 RAC3P60763 192 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 SLC35A1P78382 337 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 ADARB1P78563 741 aaKnown RBP11.98□□□□□ -0.49
CLK4-210ENST00000522136 GINS1Q14691 196 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 MFSD13AQ14CX5 517 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 SGCBQ16585 318 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 MS4A18Q3C1V0 323 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 ACSM5Q6NUN0 579 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 MEIOBQ8N635 442 aa11.98□□□□□ -0.49
CLK4-210ENST00000522136 LRRC75AQ8NAA5 344 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms