RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 ZNF75AQ96N20 296 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 CPNE1Q99829 537 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 BAG1Q99933 345 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 CCDC106Q9BWC9 280 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 MS4A7Q9GZW8 240 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 TNFRSF19Q9NS68 423 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 SLC6A13Q9NSD5 602 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 GAR1Q9NY12 217 aaKnown RBP7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 CPSF2Q9P2I0 782 aaKnown RBP7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 ASH2LQ9UBL3 628 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 KCNE5Q9UJ90 142 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 GRID1Q9ULK0 1009 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 SLC9A8Q9Y2E8 581 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 KCNE3Q9Y6H6 103 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 CENPVL1A0A0U1RR11 272 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 SRRM5B3KS81 715 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 E7ESA3 106 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 MANBAO00462 879 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 BCAS1O75363 584 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 UPK3AO75631 287 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 RSL1D1O76021 490 aaKnown RBP7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 PPP1R3DO95685 299 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 CSF1P09603 554 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 ZNF35P13682 527 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 ZNF12P17014 697 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 SSTR1P30872 391 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 CD80P33681 288 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 CRYBB2P43320 205 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 PRKAG1P54619 331 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 CDH13P55290 713 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 UBE2NP61088 152 aaKnown RBP7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 CCL8P80075 99 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 C2orf80Q0P641 193 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 PDIA2Q13087 525 aaKnown RBP7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 SKP2Q13309 424 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 FXNQ16595 210 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 C2orf68Q2NKX9 166 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 DEFB112Q30KQ8 113 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 VPS26BQ4G0F5 336 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 OTUD3Q5T2D3 398 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 RAPH1Q70E73 1250 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 ADGRG3Q86Y34 549 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 POMGNT2Q8NAT1 580 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 RAB8BQ92930 207 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 PHF21BQ96EK2 531 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 THUMPD3Q9BV44 507 aaKnown RBP7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 BTBD2Q9BX70 525 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 LAT2Q9GZY6 243 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 ZNF385DQ9H6B1 395 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 MARCH7Q9H992 704 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 CRLF2Q9HC73 371 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 CTPS2Q9NRF8 586 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 ACER3Q9NUN7 267 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 NECAP2Q9NVZ3 263 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 INSIG2Q9Y5U4 225 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 RYR1P21817 5038 aa7.48□□□□□ -1.21
TRAPPC9-212ENST00000521944 LYSTQ99698 3801 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 TCRBV9S1A1TA0A576 114 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 FAM159BA6NKW6 160 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 K7EIL1 84 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 GTPBP1O00178 669 aaKnown RBP7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 ZNF264O43296 627 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 DNPH1O43598 174 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 C2P06681 752 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 ANXA4P09525 319 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 TFPIP10646 304 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 BCKDHAP12694 445 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 PAX7P23759 505 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 GLRXP35754 106 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 RAD52P43351 418 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 MTNR1AP48039 350 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 HTR6P50406 440 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 OR2B6P58173 313 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 SEC61A1P61619 476 aaKnown RBP7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 PAX8Q06710 450 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 ILF2Q12905 390 aaKnown RBP7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 HSPB3Q12988 150 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 CBFBQ13951 182 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 PPP1R7Q15435 360 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 ALKBH6Q3KRA9 238 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 TECRLQ5HYJ1 363 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 REP15Q6BDI9 236 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 CDC73Q6P1J9 531 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 AAED1Q7RTV5 226 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 MDP1Q86V88 176 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 COX18Q8N8Q8 333 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 SLC25A43Q8WUT9 341 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 ST8SIA1Q92185 356 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 CDS1Q92903 461 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 CIDECQ96AQ7 238 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 ZNF317Q96PQ6 595 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 ALKBH3Q96Q83 286 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 TSPAN32Q96QS1 320 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 TRIM5Q9C035 493 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 SERINC1Q9NRX5 453 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 NMRK1Q9NWW6 199 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 SIRT5Q9NXA8 310 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 SEC14L4Q9UDX3 406 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 SNX6Q9UNH7 406 aa7.47□□□□□ -1.21
TRAPPC9-212ENST00000521944 TRAPPC4Q9Y296 219 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms